BIOTECHNOLOGY IN INDIA: INITIATIVES AND ACCOMPLISHMENTS
Edited By Dr. Niladri Bag
Hardback
eChapter
The book provides information in its various chapters on some of the latest aspects of micropropagation, microbiology, biofertilizer, nanotechnology, RNA interference, metabolomics, biosurfactants, secondary metabolites, cancer therapy, biofuel and biostatistics etc. All the chapters have been well compiled with great dedication and sincerity and authors own the authenticity of information available in the book. The book will be useful to large sections of people of diverse occupations including students, researchers, teachers, scientists, planners and policymakers, general readers and intellectuals etc.
Preface
List of Contributors
1. Metabolomics – A New Approach in Plant Biotechnology
Arun KP
Abstract
Introduction
Metabolomics
Application of metabolomics in plant biotechnology
Metabolomics in natural product research
Liquid chromatography mass spectrometry in metabolomics
Liquid chromatography mass spectrometry and untargeted metabolomics
Conclusion
References
2. Biotechnological Approaches for Biosynthesis of Camptothecin, an Anticancer Alkaloid from Nothapodytes nimmoniana (Grah.) Mabb.
M. Ayyanar, M. Gopalakrishnan and T. Sekar
Abstract
Introduction
Discovery of Camptothecin
Pharmacological activities of Camptothecin
Sources of Camptothecin
Biotechnological approaches for biosynthesis of biomolecules
Authentication of medicinal plants for standardization and
quality control
Nothapodytes nimmoniana: distribution of the plant
Taxonomic description of N. nimmoniana
Market value of Camptothecin
Biosynthesis of Camptothecin from N. Nimmoniana
Biotechnological approaches for biosynthesis of CPT
from N. nimmoniana
Biosynthesis of CPT from regenerated plants
Biosynthesis of CPT from callus cultures
Biosynthesis of CPT from cell suspension cultures
Biosynthesis of CPT from hairy root cultures
Biosynthesis of CPT from in vitro grown plantlets
Precursor feeding to increase the production in CPT
Conclusion
References
3. In vitro Propagation of Oak (Quercus sp.) of Kumaun Himalaya
Aseesh Pandey and K. Chandra Sekar
Abstract
Introduction
In vitro propagation
Shoot multiplication
Rooting and Hardening
Conclusion
References
4. Micropropagation of Bamboo Towards Large Scale Production of Tissue Culture Raised Bamboo
Niladri Bag
Abstract
Introduction
Tissue culture studies of bamboo
Bamboo Micropropagation using Juvenile Explants Bamboo Micropropagation using explants from field
grown plant
Somatic Embryogenesis
In vitro Flowering
In vitro Rooting
Acclimatization
Conclusion
References
5. Bacilli as Bioinoculants for Sustainable Agriculture and Its Challenges
Pankaj Kumar and R. C. Dubey
Abstract
Introduction
Bacilli as Plant Grwoth Promoting Rhizobacteria (PGPR) and biocontrol agents
Carriers
Bioinoculants
Solid based Bioinoulants
Liquid based Bioinoculants
Other advantages of Liquid Bio-fertilizers
Bureau of Indian Standards (BIS) norms for Bioinoculants
Prospects of Use of Biofertilizers
Challenges in Bioinoculants
Challenges in Selection
Challenges in Application
Challenges in Commercialization
Conclusion
References
6. Application of Biosurfactants in Agriculture and Bioremediation: An Indian Perspective
Parthasarathi R, Abitha B, Shalini D, Gomathi M, Allen John Henry, Kathireshan A.K, Tongmin Sa, and Melvin Joe M
Abstract
Introduction
Biosurfactant nature, structure and chemical properties
Types of Biosurfactant
Low molecular-weight biosurfactant
High molecular-weight biosurfactant
Biosurfactant producing microorganisms
Genes involved in biosurfactant biosynthesis
Genes involved in Sophorolipid biosynthesis
Genes involved in Surfactin biosynthesis
Genes involved in Putisolvin biosynthesis
Metabolic pathways involved in Biosurfactant synthesis
Strategies for enhancement of biosurfactin production
Mutation
Recombinant DNA technology
Metabolic engineering
Response Surface Methodology
Optimization of medium components for biosurfactant
production
Optimization of experiments involving synthetic /
chemically defined media
Optimization of experiments involving undefined media
Application of biosurfactant in Agriculture
Application of biosurfactant in Environmental remediation
Conclusion
References
7. Hot Springs of Sikkim: Biotechnological and Sociological Importance
Sayak Das, Ishfaq Nabi Najar, Mingma Thundu Sherpa and
Nagendra Thakur
Abstract
Introduction
Hot Springs
Importance
Microorganisms at Hot Springs
Thermophiles
Biotechnological Applications of Thermophiles
Thermophilic enzymes and its application
Hot Springs in Sikkim
Polok Tatopani
Borong Tatopani
Reshi Tatopani
Yumthang Tatopani
Dzongu Tatopani
Balneotherapy
Chemical constituents and mineralogy of Polok, Borong and
Reshi Tatopani
Social significance
Conclusion
References
8. Medicinal Plants and Their Conservation: An Indian Perspective
Mithilesh Singh and Shailendra Pradhan
Abstract
Introduction
Scenario of Indian medicinal plants
Need for medicinal plant conservation
Strategies for medicinal plant conservation
In vitro propagation
Short to medium term storage
Cryopreservation
In vitro secondary metabolite production
Limitation and prospects of medicinal plant conservation
Conclusion
References
9. Algal Biofuel: A Sustainable Green Energy
Laxuman Sharma and Akhilesh Kumar Singh
Abstract
Introduction
Biofuels and their categories
Algae: Potential feedstock for biodiesel production
Conversion of Algal Lipid into Biodiesel : Transesterification
Benefits of algal biodiesel over petroleum diesel
Algae: feedstock for Bioethanol and biogas production
Bioethanol production
Biogas production
Economics of producing microalgal biofuel
Conclusion
References
10. Nanobiotechnology Perspectives: Role of Nanobiotechnology in Medical and Dental Health
Prabhanjan KV, Manoharan P.S, Soundravally R, and Agieshkumar.B.
Abstract
Introduction
Nanobiotechnology and medicine
Notechnology in disease diagnostics-brief overview
Nanobiotechnology in drug delivery
Nanomedicine in cancer therapy
Treatment and diagnostics of Cardio Vascular Diseases
(CVDs)
Nanotechnology in diabetics research
Nanotechnology in dental research
Nanotechnology and gene therapy
Conclusion
References
11. Role of Plant Secondary Metabolites in Cancer Cell Therapy
Jagjit Kaur, Diwakar Aggarwal and Kuldeep Kumar
Abstract
Introduction
Major Secondary Metabolites Used as Anti-Cancer Agents
Vinca Alkaloids
Camptothecins
Taxol
Berbamine
b-Lapachone
Podophyllotoxin
Production methodology
Biotechnological methods
Callus and suspension culture
Elicitors
Plant organ culture
Immobilization
Bioreactors used in the Production of Plant Secondary
Metabolites
Conclusion
References
12. RNA Interference: An Efficient Tool for the Study of Plant Functional Genomics
Kulbhushan Chaudhary, Anirudha Chattopadhyay and
Dharmendra Pratap
Abstract
Introduction
Components of RNAi Machinery
Inducer: That induces the game.
DICER: The initiator to “Dice” the dsRNA.
Argonaute family: At the centre of RNA Induced Silencing
Complex (RISC)
RNA-induced silencing complex (RISC): The effector to
“Slice” the mRNA
RNA-dependent RNA polymerase (RdRp)
Molecular Mechanism of RNAi
MiRNAs
Plant miRNA biogenesis
Difference between siRNA and miRNA
Vector used in RNAi based functional genomics
Delivery of RNAi in plants
RNAi as a tool for functional genomics:
Advantages and limitations of RNAi as a functional genomics tool
Conclusion
References
13. Meta Analysis: An Advanced Statistical Tool for Biological Research
Arundhati Bag and Niladri Bag Abstract
Introduction
Definition, Advantages and Limitations of Meta-analysis
Process of conducting Meta-analysis
Applications of Meta-analysis
Health Sciences
Plant Science
Conclusion
References
Abbreviations
Index
Arun KP
Preface Biotechnology is a key technology for the new millennium. It has wide range of applications in plant science, agriculture, medicine and medical science, food processing, environmental sciences, mining, nanotechnology and nanoelectronics etc. The potential for altering the genetic structure and characteristics of living organisms, including humans, plants and animals, has opened a huge opportunity for development and also raised several concerns about safety and ethical implications of the new technologies. Industrial biotechnology involves the use of enzymes and microorganisms to produce value-added chemicals from renewable sources and it is being used in big ways by chemical, pharmaceutical, food, and agricultural industries. The areas which may be greatly impacted by such applications/ innovations and research on biotechnology are very wide ranging and may include diverse fields such as agriculture, floriculture and horticulture, medicinal & aromatic plants and forestry sector, soil fertility management, microbial products, traditional fermented foods and beverages, vaccine production, animal health including reproduction & nutrition, aquaculture, human health and as well as gene pool conservation and utilization, etc.
Arun KP
Abstract Dietary phytochemicals and herbal medicines are under intensive investigation for their potential as chemopreventive agents against various diseases due to the wide variety of microbial and plant functionally relevant secondary metabolites. The chemical diversity of phytochemicals, as well as phytochemicals and complex metabolic interactions between the biological systems may exceed the capacity of the platforms of traditional analysis, and therefore pose major challenges in the study of chemopreventive phytochemical compounds.
M. Ayyanar, M. Gopalakrishnan and T. Sekar
Abstract Biotechnology offers an opportunity to exploit the cell, tissue, organ or entire organism by growing them in vitro and to genetically manipulate them to obtain desired compounds. It plays a pivotal role in search for alternatives to production of desirable biomedical compounds. There are several approaches have been used to increase the yield of metabolites from cell cultures such as manipulation of nutrient medium, application of exogenous growth stimulators, chemical treatment, precursor feeding, elicitation, transformed cultures, metabolic engineering, micropropagation, bioreactor cultures and etc.
Aseesh Pandey and K. Chandra Sekar
Abstract Quercus species of family Fagaceae are very important from both economic and ecological perspectives. These exhibit irregular fruiting, and produce seeds recalcitrant to storage, thereby difficult to propagate through conventional procedures. Again because of their very difficult to root nature, extremely limited success has been observed in vegetative propagation. Application of new technological approaches like in vitro propagation may be of interest for accelerating tree improvement programs to these hardwood species. This review provides a summary of the advancement in the application of in vitro propagation to oak species of Kumaun West Himalaya India.
Niladri Bag
Abstract Bamboo is nature’s unique gift to mankind. It has tremendous scope for use in eco-friendly agro-forestry programmes, to bring marginal lands into use. The requirement for bamboo is increasing for various traditional and industrial requirements. In India almost 99% of annual bamboo production comes from the natural forests and only about 1% is derived from plantations.
Pankaj Kumar and R. C. Dubey
Abstract Bacilli, a group of endospore forming bacteria present in soil, contribute directly or indirectly to crop productivity. Bacilli have many physiological unique traits like multilayered cell wall, stress resistant endospore formation, secretion of peptide antibiotics, peptide signal molecules, extracellular enzymes, which make them ubiquitous and assist to their survival under adverse environmental conditions for long time.
Parthasarathi R, Abitha B, Shalini D, Gomathi M, Allen John Henry, Kathireshan A.K, Tongmin Sa and Melvin Joe M
Abstract Biosurfactants (BS) are amphiphilic compounds produced by microorganisms mainly bacteria and are known to contain hydrophobic and hydrophilic moieties that play a major role in reducing surface tension (ST) and interfacial tensions between individual molecules. Chemically, BS is a complex molecules consisting of lipopeptides, glycolipids, polysaccharide protein complex, fatty acids and phospholipids. They are known for their biodegradability, low toxicity, and renewable nature.
Sayak Das, Ishfaq Nabi Najar, Mingma Thundu Sherpa and Nagendra Thakur
Abstract Thermophiles mainly harbor in highly temperate environments such as hydrothermal vents, hot springs, fumaroles etc. The main importance of thermophiles is due to their thermostable proteins, enzymes and their adaptive mechanisms at higher temperature which are very useful for industrial applications. The main rationale behind this research was to isolate industrially important thermophilic bacteria from the Hot Springs of Sikkim which can be used as tools for genetic engineering and vector based research activities.
Mithilesh Singha and Shailendra Pradhanb
Abstract Since the beginning of the civilization, medicinal plants have been used to prevent and treat various ailments. At present, most of the pharmaceutical/ nutraceutical industries highly depend on wild medicinal plants for the supply of raw materials for extraction of bioactive compounds. As medicinal plants receive increased scientific and commercial attention, there is increasing pressure on the wild medicinal plant populations.
Laxuman Sharma and Akhilesh Kumar Singh
Abstract Modern world is experiencing energy insecurity because of extreme population pressure and depleting energy resources. Fossil fuels though have highly applauded for contributing to today’s development, are non renewable energy and debated for not sustainable. This has posed serious challenges to the scientific fraternity for finding the suitable alternatives. A cheap, eco-friendly, sustainable or renewable type of energy is visualized for development with added advantage of mitigating green house gases.
Prabhanjana K.V., Manoharan P.S., Soundravally R. and Agieshkumar B.
Abstract Nanotechnology is an emerging field that offers various potential applications in the areas of agriculture, health and medicine. Recent advances in the design and synthesis of nano-materials aids for developing sophisticated nano-devices for clinical research and practice. Applications of nano materials in medicine includes disease diagnosis, early prognosis, detection of pathogens, tumor detection, tissue engineering, target specific drug delivery, development of biomaterials for oral health and understanding of cellular mechanisms in live cells using molecular imaging.
Jagjit Kaur, Diwakar Aggarwal and Kuldeep Kumar
Abstract Cancer is a potent disease causing nearly 6 million deaths per year worldwide. There are a number of cancers such as skin, brain, lung, breast, stomach, colon and blood cancer caused due to number of factors like unbalancing of hormones, smoking etc. Cancer could be treated by chemotherapies or through irradiation therapies.
Kulbhushan Chaudhary, Anirudha Chattopadhyay and Dharmendra Pratap
Abstract As we have entered in the post genomic era where we have successfully completed the full genome sequencing of many important crop species and now the future challenge is to ascertain the functions of all genes present in plant genome.
Arundhati Bag and Niladri Bag
Abstract Meta analysis quantitatively summarizes the findings of a large collection of individual experiments. It is a powerful statistical tool since it integrates a vast literature and thus includes large sample size. It leads to a stronger conclusion than traditional literary review as studies are analyzed applying statistical methods. Meta- analysis is increasingly being applied in different fields of biological sciences. It has been emerged as an independent subfield of modern health science researches as in this field very few studies achieve statistical power in isolation. Meta- analysis has also become an integral part of plant science research, e.g., agricultural research, ethnobotanical research, tea and health science research etc. Meta-analysis has few limitations although rigorously conducted meta- analyses are considered more valuable than any single study contributing to the analysis.
Index Symbols (R)-3-((R)-3-hydroxyalkanoyloxy) alkanoic acids (H 126 (R)-3-hydroxyoctanoate-1-¹³C 126, 255, 41, 85, 140 2-keto-3-deoxy-6-phosphogluconate 300, 131 A ACC deaminase 91 Acclimatization 53, 56, 57, 79, 80, 86, 88, 188 Acetyltransferase 125 Acinetobacter radioresistens 114, 122 Acinetobacter sp. 120, 122, 135, 144 ACP-ligases 131 Acyl carrier protein 148 Acyl moiety 124 Age memory 64 Agriculture 24, 38, 86, 89, 90, 92, 93, 96, 97, 98, 100, 106, 112, 111, 112, 137, 146, 198, 199, 201, 204, 223, 265, 276, 297, Agro industry wastes 141 Agrobacterium rhizogenes 258, 263, 28, 40 Agrobacterium tumefaciens 258, 276 agrochemicals 95, 97 Alanine-Valine 120 Alkanoate 124 Altergenicity 106
Keywords
micropropagation, microbiology, biofertilizer, nanotechnology, rna interference, metabolomics, biosurfactants, secondary metabolites, cancer therapy, biofuel, biostatistics, plant biotechnology, medicinal plants, algal biofuel, nanobiotechnology, functional genomics