eChapters

The tentative diagnosis of viral diseases of livestock can be made by clinical symptoms alone. The clinical diagnosis is substantiated by the laboratory to obtain a precise, correct and prompt diagnosis. The success however depends on the collection of suitable materials in proper transport medium at a particular stage of disease condition and its dispatch to the laboratory in a manner that little or no alterations occurs in the specimen. This would facilitate the isolation and identification of the causative viral agents easily.

On the face of an outbreak of a disease, collection of right clinical specimens in proper preservative, their transportation to the laboratory under ideal conditions and quick processing of specimens in the laboratory to identify the causative agent are crucial to successful control of the disease. This attains more importance when a highly contagious disease appears.

Collection of specimens from a virus-infected host is the first step for demonstration or isolation of a virus. Specimens for virus isolation should be collected at the time when the maximum amount of virus can be expected to be present. i.e. collect the specimens as early as possible after the onset of clinical symptoms. In many viral diseases maximum viral production occurs before the patient becomes ill so that it is ideal to collect the specimen at an even early time.
The nature of the specimen taken in any particular instance is determined by the patient’s clinical syndrome and previous history. They are best considered under three main headings.

1. Specimen for virus isolation/antigen detection/ nucleic acid detection
2. Specimen for serological investigation
3. Specimen for direct examination

To identify parasitic infections, it is essential to examine excretory- secretory products (ESPs), viz., faeces, urine, sputum and nasal discharges as examination of such material is essential for clinical diagnosis. It is extremely rare to get an animal completely free from parasites and at the same time all animals may not show signs of disease. Most of the important helminths and coccidia inhabit intestinal tract. Therefore, clinical diagnosis of gut dwelling helminths and coccidian depends mostly on identification of ova/oocyst in faecal samples

For the laboratory diagnosis of the parasitic infections, it is essential to examine various excretory-secretory products, viz., faeces, urine and nasal discharges as  examination of such material is essential for clinical diagnosis. It is extremely rare to get an animal completely free from parasites and at the same time all animals may not show signs of disease. Since, most of the important helminths and coccidia inhabit intestinal tract, therefore, clinical diagnosis of gut dwelling helminths and coccidia depends mainly on identification of ova/oocyst in faecal samples.

Trace minerals have long been identified as essential components in the diets of domestic livestock species. Trace minerals exist in cells and tissues of the animal body in a variety of chemical combinations, and in characteristic concentrations, depending on the trace mineral consumed and the tissue in which it is metabolized. Concentrations of trace minerals must be maintained within narrow limits if the functional and structural integrity of the tissue is to be maintained and the growth, health, and productivity of the animal are to remain unimpaired. Minerals are as vital to cattle as grass, water or air.

Introduction

The quality of interaction between clinicians and microbiologists has an enormous influence on the effectiveness of the laboratory service. An accurate diagnosis is based on the interpretation of both clinical and laboratory data. Investigation of disease is solely dependent on the quality and appropriateness of the specimens collected. The diagnosis depends on the skill and care with which the clinicians select, collect and transport the specimen to the laboratory. Clinical history, including the tentative diagnosis, should always accompany the specimen. If available, a detailed post-mortem report must also be sent. These set of information will help the microbiologist to select the most appropriate procedure and to furnish a meaningful interpretation of the results.

Specimens need to be collected for establishing a disease diagnosis or monitoring of vaccine response or surveillance. The knowledge of the pathogenesis of the infectious disease is the most important factor for determining the most suitable specimen. The samples need to be appropriate, and adequate in number and amount to provide a statistically valid result. Samples must be taken with care, to avoid undue stress or damage to the bird or danger to the operator. Careful consideration must be given to the collection, containment, and storage of the specimens, including biosafety measures to prevent spillage to the environment or exposure of other birds and humans.

The collection, transportation, and preservation of fish samples for laboratory analysis in India demand strict adherence to standardized protocols. In a country where aquaculture contributes significantly to the economy, improper sample handling can result in inaccurate diagnoses, compromising disease surveillance, biosecurity, and productivity.
Accurate diagnostic outcomes begin with the proper selection of specimens. Ideally, moribund fish or those freshly dead (within six hours) should be chosen, as decomposition rapidly degrades tissue quality. Samples may include whole fish or tissue from critical organs such as the gills, liver, kidney, spleen, and skin lesions.
Dissection must be conducted using sterile instruments—scissors, scalpels, and forceps—and tissue samples should be placed in sterile containers or cryovials. To prevent contamination, aseptic techniques are crucial: sterilize instruments between each sample and disinfect the fish’s external surface using 70% ethanol prior to sampling.
Maintaining the biological integrity of samples during transit is essential. Most samples must be stored at approximately 4°C using insulated boxes with ice packs. If live fish are needed, they can be transported in oxygenated plastic bags or aerated containers.
Samples should ideally arrive at the laboratory within 12 to 24 hours of collection. For extended transit times, special media—such as brain heart infusion broth for bacterial samples or viral transport medium for virology—should be used. Every sample must be accurately labeled with details including collection date, species, location, and observed symptoms. A submission form should accompany the samples, including environmental data and mortality history.

Hard tongue due to fibrous tissue proliferation (termed as wooden tongue) is a characteristic feature.

Swab and smear from abscess and tissue samples including tongue and lymphnodes.

INTRODUCTION

COLLOIDS :  The word colloids has actually been derived from Greek language where it means glue like. The science of colloids was founded about 1861 when Thomas Graham published a summary of his work on the diffusion of substances in solution. He classified substances into two groups, viz: crystalloids and colloids, depending on their ability to diffuse through parchment membrane. According to Graham, crystalloids readily passed through parchment membranes while colloids did not. According to modern concept, colloidal solution contain substances whose molecular aggregates possess a diameter greater than 1 mu  and less than 100 mu. If the particle size is greater than 100 mu, a suspension is obtained (Table 1).

My first experience with Colocasia gigantea (Blume) Hook. f. (Araceae) was one of personal cultural food use. I recently came to Hawai‘i for my Ph.D. studies, and although I am Vietnamese, it was in Hawai‘i that I began experiencing many Vietnamese foods I never knew as a child growing up in the northeastern U.S. I thank the Vietnamese immigrants in Hawai‘i that became my aunties and uncles from whom I learned a great deal about my roots and the food of Vietnam. I listened to their stories and teachings while we ate together at holiday and community events, reflecting on my childhood, and considering the effects of globalization on the movement of people and plants, I have come to understand the extraordinary significance of that seemingly mundane first experience of eating C. gigantea. In this paper, I describe the botany, ethnobotany,  including a case study of C. gigantea usage in Hawai‘i and the implications for biocultural diversity, and examples for increased utilization of C. gigantea.

• Source of colour

• Colour changes in fishes

• Regulation of colour changes

• Significance of colour changes.

The coloration is most well-marked in fishes A large number of fishes are brightly and brilliantly coloured and others are of more uniform and sober shade. On fish body characteristics markings in the form of base strips, spots and blotches etc. coloration is mainly due the skin pigments but the back-ground colour may also be due to the underlying tissues and body fluids. Coloration relates to the life style of the fishes and the patterns so produced have functional significance.

Generally the fishes are darker on their upper surfaces this is because their upper surfaces being exposed to sun light undergo pigmentation, while ventral surface with gradual shading on the sides. Some fish species like the gold fish, carassius exhibit almost uniformly bright colour all over the body. Cave fishes living in total darkness have lost the pigments and grown colourless. Several species of the genera synodontis living in the river of Africa swim in inverted position and so the pigmentation is reversed in them.

Steps in the Estimation of Trace Elements
Estimation of trace elements in feeds and fodders and other biological materials involves the following steps :

    1.    Production of an acidic solution of the inorganic elements in the biological samples after removal of the organic matter by dry ashing or wet oxidation.

    2.    Removal or masking of interfering substances.

    3.    Determination of the selected elements, usually by using colorimetry.

Results of trace elements determinations are expressed as parts per million (ppm), mg/kg or µg/g dry matter.

Introduction

Colorimetry is a scientific technique widely used across various fields to quantify the concentration of substances based on their color intensity. Colorimetry is a branch of analytical chemistry that focuses on measuring the absorbance or transmission of light by colored solutions. It utilizes the principles of optics and spectroscopy to determine the concentration of a substance in a solution based on its color intensity. This technique relies on the Beer-Lambert law, which states that the absorbance of light by a solution is directly proportional to its concentration and path length.

Principles of Colorimetry

The fundamental principle of colorimetry lies in the interaction of light with matter. When light passes through or is reflected off a substance, certain wavelengths are absorbed, while others are transmitted or reflected. The color we perceive is due to the wavelengths of light that are reflected back to our eyes. In colorimetry, a photometric measurement is made using a colorimeter or spectrophotometer, which quantifies the intensity of light absorbed or transmitted by a sample.

Introduction Colostrum feeding • Colostrum is rich source of gamma globulins (antibodies), vitamins and minerals • Colostrum Temp.: 99ºF-102ºF • Colostrum feeding: first 3-5 days. • Whole milk: after 5 days • Feed the total amount of milk at 3 or 4 equal intervals up to the age of 7 days and then twice daily • Quantity of colostrum: 10 % of body weight. • Overfeeding: calf scour/diarrhea. • Around 0.5% of a cow’s yearly milk production is made up of colostrum. • After birth, the amount of immunoglobulins that can be absorbed from colostrum drops by 1/3 as soon as 6 hours, by 2/3 after 12 hours, and an intestinal barrier forms after 24 hours. • Colostrum must be given in sufficient amounts to the newborn calf because during the first 24 hours after parturition, the permeability of the stomach and the concentration of immunoglobulins drop sharply. • Cow colostrum must meet minimum requirements for both immunological and bacteriological characteristics:

Water colour is consequences of the plankton, humus, metal ions (iron and manganese), weeds and peat materials, presence in water. Iron oxides cause reddish color whereas Manganese oxides causes brown or brackish colour in water. Water colour of an aquatic body also indicates the density of planktons. Brownish colouration without any foul smell is an indication of good growth of zooplankton. Phytoplankton or algae are usually green in colour and these green alage in large quantities turn the green color of water. Water color suggests plankton or other aquatic life growth, clear and transparent colour of water indicates low and poor growth of plankton. Brownish green to greenish brown colour of water indicates well for aquaculture.
Principle
Natural waters colour comprising yellow-brownish in appearance. It has been observed that potassium chloroplatinate (K2PtCl2) tinted with small amounts of CoCl2 yield colours that are very much like the natural colours of water. 1 mg/L of Pt (K2PtCl6) produces a standard 1 unit of colour. The intensity of colour increases as pH rises. For this reason recording pH together with colour is advisable.

Poultry industry in India has registered a phenomenal growth during the last four decades making it one among the world leaders in poultry production. The development of organized poultry has in fact masked the contribution of backyard poultry or house-hold poultry of rural sector. Backyard poultry production in India is characterized by small flock size consisting of 5-10 predominantly non-descript birds maintained in extensive system under zero input conditions but fetch the owners much needed animal protein and supplementary income. Importance of backyard poultry is well recognized by Government of India and special programmes are formulated for its promotion.

Non-descript Chicken

Maintaining small flocks of local non-descript fowls under free range condition by landless poor, small and marginal farmers are a common sight in rural areas. These birds are very popular due to their adaptability to local agro climatic conditions and management practices with prominent brooding behaviour and mothering ability. But these birds are small in size, poor layers (40-50 eggs/ annum), with small clutch size and intense brooding behavior, thus making them not suitable for commercial exploitation.

Celite Column Chromatography
(Method of Wiseman and Irvin, 1957)
Principle

Celite columns with an internal indicator have been developed for the quantitative separation of silage and rumen volatile fatty acids ranging from butyric to succinic. The aqueous phase employs minimal amounts of sulphuric acid to prevent retention of organic acids, sugar is added to the phase to increase elution resistance. Aqueous samples, 2 ml or less are added directly to a dry column cap. Eluting solvents are mixtures of acetone and petroleum ether. Single zone collections make possible a reduced number of titrations with increased accuracy. The column permits fairly wide separations of lactic acids, often difficult on silicic acid columns.

The method employs celite with alphamine red R as an internal indicator. A distinctive feature is the use of concentrated sugar solution as the stationary phase to resist leaching action of solvents.

Column chromatography is a separation technique in which the stationary bed is in a tube. The particles of the solid stationary phase or the support coated with a liquid stationary phase may fill the whole inside volume of the tube (packed column) or be concentrated on or along the inside tube wall leaving an open, unrestricted path for the mobile phase through the tube (open tubular column). Differences in rates of movement through the medium are calculated as different retention times of the sample.
 
The separation of compounds in the column chromatography takes place based on the phenomenon of adsorption. Here the substance gets attracted by electrostatic forces to the surface of a unit particle. If the substance is in solution and the particle insoluble in the solvent, then part of the substance is adsorbed and part remains in solution. The ratio between the amount adsorbed and the amount in solution is a constant called adsorption coefficient. The separation takes pace based on the differences in the adsorption coefficients.

Wet litter can be caused by extrinsic or intrinsic factors related to excessive excretion of water. When the moisture content of litter exceeds 35%, it can lead to various issues, including pododermatitis of the foot pads, resulting in poor growth rate in broilers and low fertility in breeder flocks. Wet litter can also contribute to inflammation of the feather follicles. This can lead to gangrenous dermatitis, which is responsible for downgrading at processing or rejection by consumers. Additionally, wet litter is often associated with outbreaks of coccidiosis, as the oocysts of Eimeria spp. require moisture levels over 25% to mature. Necrotic enteritis occurs frequently in houses with areas of wet litter, while damp litter may contribute to the proliferation of toxic fungi.

Abstract

Livelihood of ~80% of rural inhabitants depends upon agriculture that relies upon the prevailing environmental conditions such as water availability and temperature. If unfavorable to the crops, these conditions would impact production and productivity leading to food-insecurity. Various abiotic stresses are generated due to the physiography that includes altitude, topography, edaphic factors, water availability and ecosystem degradation. In spite of the environmental limitations, crops have survived suggesting operation of relevant adaptive mechanisms in the native species. Indeed, novel genetic mechanisms were present and these could be utilized to improve the plant productivity under stress conditions. Also there are issues on the management of abiotic stresses, which need to be addressed. The chapter presents framework and policies on sustaining agriculture production under the situations of abiotic stress to ensure production sustainability by protecting livelihood of the inhabitants. Western Himalaya was deliberately chosen as the focus for discussion.