eChapters

Male Reproductive System

Male reproductive system (Fig. 15) consists of testes, epididymis, vas deferens and papillae.

Cocks have two ovoid creamy white testes, of which the left one is slightly larger than the right. Testes are located in the fore end of the kidneys in the abdominal cavity. Closely attached to the testes is short epididymis that continues as vas deferens which ends in the cloaca. The copulatory apparatus consists of two papillae and a rudimentary copulatory organ, the phallus which is located on the median ventral portion of one of the transverse folds of cloaca. Accessory reproductive organs like seminal vesicles, prostrate and Cowper’s glands are absent in the cocks. The phallus is small and has associated lymph glands that produce a fluid which is added to the semen.

The spermatozoa pass through the epididymis and are stored in the distal end of the vas deferens. The sperm after mating is stored in the folds in the oviduct of the hen to effect fertility up to six days. The spermatozoa of the cock have a long cylindrical head with a pointed acrosome, a short mid-piece and a long tail. Cocks produce about 0.5 -1 ml of whitish semen per ejaculate with a sperm concentration of 2- 4 billion.

The word indigenous, originates from the Latin work, indigena, implies that the individual and its ancestors originated from a specified country or continent. Presently, certain synonymous words used for indigenous chicken are: ‘native’, ‘local’ or ‘village chicken’. The indigenous fowls are well adapted to the local climate, need less input and produce tasty egg and meat at the least possible cost through scavenging. The birds require no scientific feeding, health care, housing and management and thus make the indigenous birds suitable for backyard poultry farming. Indigenous birds are normally handled by women, can significantly contribute to farmers’ livelihoods through increased food security and cash income. These breeds are self-propagating; contribute to poultry diversity and cultural heritage. Because of their local origin they are less prone to disease or predator attacks, and their cultural and sporting values secure additional income. The prices of egg and meat of local birds are 100- 150 percent higher than that of commercial counterpart. Some of these fowls are described in brief, as below.

The modern breeds of chicken have known to be descended from the wild jungle fowl. India, Nepal, Bangladesh, Myanmar, Thailand, Sri Lanka and Malaysia are the homeland to these jungle fowls. There are four known species of jungle fowl viz. Gallus gallus (Red jungle fowl), Gallus lafayetti (Ceylon jungle fowl), Gallus sonnerati (Grey jungle fowl) and Gallus varius (Java jungle fowl). The domestic breeds of chicken/fowl have originated from Gallus gallus.

The modern commercial poultry production in India is barely 50 years old, although backyard poultry keeping dates back to pre-historic period. In between 1955 to 1965, some Christian Missionaries had imported White Leghorn, Rhode Island Red and White Rock breeds, to upgrade the local chicken, having very high disease resistance power; but highly broody. Later, hybrid broiler (Arbor Acres) and layer (Babcock) strains were brought to India in early seventies, to start modern poultry industry. Among the two, the layer industry took wings early and registered a spectacular growth rate between 1970 and 1985. The broiler industry came to existence five years later and showed 25 -100% annual growth rate initially and 10-20% growth rate subsequently; between 1975 – 2005. The growth indicators of poultry development in India are presented

Introduction

Drought is one of the primary factors responsible for depressing rice yield in chronic areas and in destabilising rice production in drought-prone areas. It is a production constraint common to all rainfed rice cultures: wetland, upland, and deepwater (O’Toole and Chang 1979). Breeding for drought resistance, a major component of the International Rice Research Institute’s (IRRI) Genetic Evaluation and Utilization (GEU) Program since the early 1970s, aims at countering the adverse effects of drought in unfavoured rice production areas.

Rice germplasm has such remarkably rich diversity that a continuous spectrum of genotypes differing in the various physiological mechanisms can be found and is available for genetic manipulation (Chang et al. 1982a). However, effective evaluation methods are essential for unravelling the specific mechanism(s) involved and for devising eficient selection criteria in a breeding program. Moreover, the broad spread in growth duration among rice cultivars makes it impractical to obtain uniform evaluation of a large number of cultivars when they differ in physiological responses that are specific to certain growth stages. Methods that can accommodate large numbers are essential to breeding program.

Introduction

Man’s intervention in the evolution of plants, to adapt them to suit his needs, constitutes the practice of plant breeding. Historically regarded as an art and still too empirical to be accepted universally as a science, it has recently been described as a technology (Riley 1978). Whether art, science or technology, it certainly draws on a wide range of disciplines and embodies all those principles of organisation and management that determine success in any production-oriented programme.

Perhaps the biggest contribution that the plant breeder has made to increased production during the past 50 years has been in helping to alleviate the effects of natural hazards such as lodging, pests and diseases on crop production. While most of this progress has been through the manipulation of biotic stresses, much is still to be achieved under non-biotic stresses such as drought, salinity, temperature, etc. This argument is strengthened by the fact that in spite of the spectacular achievements made possible by the ‘Green Revolution’, the productivity level of most crop plants, including wheat and rice, has remained both low and static under stress conditions. Concerted efforts are needed through an approach of interdisciplinary research, since not much has been done to define criteria for stress assessment and evolving breeding approaches for incorporating stress tolerance in crop plants.

Introduction

Drought is the most common adverse environmental factor which limits crop production in different parts of the world. Often drought is accompanied by relatively high temperatures, which promote evapotranspiration, and hence could accentuate the effects of drought and thereby further reduce crop yields. Since these events occur more frequently in tropical and semitropical regions where most of the developing countries are situated, droughts are often associated with food shortages and an overall setback to developmental activities. Therefore, raising of drought-resistant crops is common sense to achieve stability in production and to enhance the possibility of self-suficiency in food. Consequently, breeding for drought resistance is a major objective of many research programmes in the international and national institutions. This has been so for the past several decades. But, it is disappointing that, there has not been any measurable success in these programmes compared with the success achieved in breeding for yield; or breeding for disease resistance or breeding for quality attributes. In fact, this was amply expressed by Arnon (1980) when he stated “Breeding for drought resistance has been a consistent theme for as long as I remember and probably the greatest source of wasted breeding efforts in the whole field of plant breeding.” However, the fact remains that we do hear of drought resistant varieties in many crops. For example, C-306 in wheat, Lalnakanda in rice and M 35-1 in Sorghum are some of the better known examples in India. It is also claimed that a large number of cultures among the Assam Rice Collection exhibit a considerably high degree of drought tolerance. Many land races and wild relatives of several crop species are said to contain drought resistant traits, which could be profitably utilised in breeding programmes. This situation is not unique to India alone but is a common experience in different parts of the world. However, to afirm a conviction a short questionnaire to assess the current state-of-art on breeding for drought resistance was distributed to 75 distinguished plant breeders and plant physiologists all over the world. The questionnaire and a summary based on the responses is as follows:

Expression of genetic potential for growth and yield of a crop variety is directly dependent upon the environment comprising both climate (weather) and soil components. As discussed in the preceding chapter, the term ‘salt-affected soils’ encompasses a broad group of adverse but distinct soil conditions, namely, saline, alkali (sodic) and acid soils with further variations such as coastal and inland locations as well as arid and water-logged situations (Swaminathan 1977; Bresler et al. 1982). Factors limiting growth and yield of crop plants in various categories of problem soils are different and specific. Likewise, adaptive strategies evolved by plants to cope with the prevailing edaphic stresses, such as salt stress, also vary a great deal as indicated in Table 1. It is not unexpected therefore, that even varieties within a crop often show notable differences regarding tolerance to adverse soil conditions (Epstein et al. 1980; Devine 1982; Shannon 1984; Sayed 1985). Hence, it is essential that the breeder must understand the inherent charaderistics of the problem soil with which he is concerned and should also simultaneously appreciate that basically it is the sensitivity of crop variety, rather than the soil parameters per se, that essentially determines the occurrence as well as the magnitude of actual soil problem (Rana 1977). Since the degree of tolerance (adaptation) of crop varieties to different kinds of salt affected soils is genetically controlled, it is axiomatic that it can be improved through genetic manipulations by adopting suitable breeding procedures.

Introduction

Accumulation of excess soluble salts in the root zone of soils resulting in partial or complete loss of soil productivity is a worldwide phenomenon. The problems of soil salinity are widespread in the arid and semi-arid areas but salt-affected soils also occur extensively in the sub-humid and humid climates particularly in the coastal regions where the ingress of sea water through estuaries and rivers and through ground water movement causes large scale soil and water salinisation. Soil salinity is also a serious problem in areas where ground waters of high salt content are the only source of water available for irrigation. By far the most serious problems of salinity are being faced in the irrigated, arid and semi-arid regions of the world. Our ability to manage salt-affected soils and waters both in the irrigated and in the unirrigated regions will constitute a major effort in meeting potential food requirements. The magnitude of the problem can be appreciated from the following.

Nanotechnology, which deals with understanding and control of matter at dimension of roughly 100 nm and below, has a cross sectoral application and an interdisciplinary orientation. At this scale, the physical, chemical and biological properties of materials differ from the properties of individual atoms and molecules or bulk matter, which enable novel applications. Nanotechnology research and development is directed towards understanding and creating improved materials, devices and systems that exploit these properties as they are discovered and characterized

There are many applications of nanotechnology such as in the area of medicine, chemistry and environment, energy, agriculture, information and communication, heavy industry and consumer goods. The alleged potential of this technology has garnered the attention of both developed and developing countries across the globe. The US National Science Foundation (NSF) has listed it as one of six priority areas; it is one of the themesin the EU Framework Program for Research and Technological Development in Europe; and it has been the focus of research in countries worldwide.

Nanotoxicology is the study of the toxicity of nanomaterials. Because of quantum size effects and large surface area, nanomaterials have unique properties compared with their larger counterparts

Nanotoxicology is that branch of bionanoscience, which deals with the study and application of toxicity of nanomaterials. The nanomaterials, even when they are made of inert elements like gold, become very active at a nanometer range. Nanotoxicological studies are intended to determine whether and to what extent these may pose a threat to the environment and to human beings. For instance, Diesel nanoparticles have been found to damage the cardiovascular system in a mouse model.

Human health and safety

Calls for tighter regulation of nanotechnology have occurred alongside a growing debate related to the human health and safety risks associated with nanotechnology. The Royal Society identifies the potential for nanoparticles to penetrate the skin, and recommend that the use of nanoparticles in cosmetics be conditional upon a favorable assessment by the relevant European Commission safety advisory committee. Andrew Maynard also reports that ‘certain nanoparticles may move easily into sensitive lung tissues after inhalation, and cause damage that can lead to chronic breathing problems’.

The societal implications of nanotechnology are the potential benefits and challenges that the introduction of novelnanotechnological devices and materials may hold for society and human interaction. The term is sometimes expanded to also include nanotechnology’s health and environmental implications, but this article will only consider the social and political implications of nanotechnology.

As nanotechnology is an emerging field andmostof its applications are still speculative, there is much debate about what positive and negative effects that nanotechnology might have.

Beyond the toxicity risks to human health and the environment which are associated with first-generation nanomaterials, nanotechnology has broader societal implications and poses broader social challenges. Social scientistshave suggestedthatnanotechnology’s social issues should be understood and assessed not simply as “downstream” risks or impacts. Rather, the challenges should be factored into “upstream” research and decision making in order to ensure technology development that meets social objectives.

Over the past few decades, the fields of science and engineering have been seeking to develop new and improved types of energy technologies that havethe capability of improvinglifeall over the world. In order to make the next leap forward from the current generation of technology, scientists and engineers have been developing Energy Applications of Nanotechnology. Nanotechnology, a new field in science, is any technology that contains components smaller than 100 nanometers. For scale, a single virus particle is about 100 nanometers in width.

An important subfield of nanotechnology related to energy is nanofabrication. Nanofabrication is the process of designing and creating devices on the nanoscale. Creating devices smaller than 100 nanometers opens many doors for the development of new ways to capture, store, and transfer energy. The inherent level of control that nanofabrication could give scientists and engineers would be critical in providing the capability of solving many of the problems that the world is facing today related to the current generation of energy technologies.

People in the fields of science and engineering have already begun developing ways of utilizing nanotechnology for the development of consumer products. Benefits already observed from the design of these products are an increased efficiency of lighting and heating, increased electrical storage capacity, and a decrease in the amount of pollution from the use of energy. Benefits such as these make the investment of capital in the research and development of nanotechnology a top priority.

Nanosensors are any biological, chemical, or sugery sensory points used to convey information about nanoparticles to the macroscopic world. Their use mainly include various medicinal purposes and as gateways to building other nanoproducts, such as computer chips that work at the nanoscaleand nanorobots. Presently, there are several ways proposed to make nanosensors, including Top-down and bottom-up design, top-downlithography, bottom-upassembly, and molecular self-assembly.

Predicted applications

Medicinal uses of nanosensors mainly revolve aroundthe potential of nanosensors to accurately identify particular cells or places in the body in need. By measuring changes in volume, concentration, displacement and velocity, gravitational,electrical, and magneticforces, pressure, or temperature of cells in a body, nanosensors may be able to distinguish between and recognize certain cells, most notably those of cancer, at the molecular level in order to deliver medicine or monitor development to specific places in the body. In addition, they may be able to detect macroscopic variations from outside the body and communicate these changes to other nanoproducts working within the body.

The impact of nanotechnology in the food industry has become more apparent over the last few years with the organization of various conferences dedicated to the topic, initiation of consortia for better and safefood, along with increased coveragein themedia. Several companies which were hesitant about revealing their research programmes in nanofood, have now gone public announcing plans to improve existing products and develop new ones to maintain market dominance. The typesof application include:smartpackaging, on demand preservatives, and interactive foods. Building on the concept of “on-demand” food, the idea of interactive food is to allow consumers to modify food depending on their own nutritional needs or tastes. The concept is that thousands of nanocapsules containing flavour or colour enhancers, or added nutritional elements (such as vitamins), would remain dormant in the food and only be released when triggered by the consumer.24 Most of the food giants including Nestle, Kraft, Heinz, and Unilever supportspecific research programmes tocapturea share of the nanofood market in the next decade.

The definition of nanofood is that nanotechnology techniques or tools are used during cultivation, production, processing, or packaging of the food. It does not mean atomically modified foodor foodproduced by nanomachines. Although there are ambitious thoughts of creating molecularfood using nanomachines, this is unrealistic in the foreseeable future. Instead nanotechnologists are moreoptimisticabout thepotential to changethe existing systemof food processingand to ensure the safety of food products, creating a healthy food culture. They are also hopeful of enhancing the nutritional quality of food through selected additives and improvements to the way the body digests and absorbs food. Although some of these goals are further away, the food packaging industry already incorporates nanotechnology in products.

Nanomedicine is the medical application of nanotechnology. The approaches to nanomedicine range from the medical use of nanomaterials, to nanoelectronic biosensors, and even possible future applications of molecular nanotechnology. Current problems for nanomedicine involve understanding the issues related to toxicity and environmental impact of nanoscale materials.

Nanomedicine research is receiving funding from the US National Institute of Health. Of note is the funding in 2005 of a five-year plan to set up four nanomedicine centers. In April 2006, the journal Nature Materials estimated that130 nanotech-based drugsanddeliverysystems were being developed worldwide.

Nanotechnology has the potential to revolutionizethe agricultural andfood industry with newtools forthemoleculartreatmentof diseases, rapid disease detection, enhancing the ability of plants to absorb nutrients etc. Smart sensors and smart delivery systems will help the agricultural industry combat viruses and other crop pathogens. In the near futurenanostructured catalysts will beavailable which will increase the efficiency of pesticides and herbicides, allowing lower doses to be used. Nanotechnology will also protect the environment indirectly through the use of alternative (renewable) energy supplies, and filters or catalysts to reduce pollution and clean-up existing pollutants.

Infrared spectroscopy (IRspectroscopy) is the spectros copy that deals with the infrared region of the electromagnetic spectrum, that is light with a longer wavelength and lower frequency than visible light. It covers a range of techniques, mostly based on absorption spectroscopy. As with all spectroscopic techniques, it can be used to identifyand study chemicals. A common laboratory instrument that uses this technique is a Fourier transform infrared (FTIR) spectrometer.

The infrared portion of the electromagnetic spectrum is usually divided into three regions; the near-, mid- and far- infrared, named for their relation to the visible spectrum. The higher energy near-IR, approximately 14000–4000 cm^–1 (0.8–2.5 μm wavelength) can excite overtone orharmonic vibrations. Themid-infrared, approximately 4000– 400 cm^–1 (2.5–25 μm) may be used to study the fundamental vibrations and associated rotational-vibrational structure. The far-infrared, approximately 400–10 cm^–1 (25–1000 μm), lying adjacent to the microwave region, has low energy and may be used for rotational spectroscopy. The names and classifications of these sub regions are conventions, and are only loosely based on the relative molecular or electromagnetic properties.

Infrared spectroscopy exploits the fact that molecules absorb specific frequencies that are characteristic of their structure. These absorptions are resonant frequencies, i.e. the frequency of the absorbed radiation matches the frequency of the bond or group that vibrates. The energies are determined by the shape of the molecular potential energy surfaces, the masses of the atoms, and the associated vibronic coupling.

A Scanning electron microscope (SEM) is a type of electron microscope that images a sample by scanning it with a high-energy beam of electrons in a raster scan pattern. The electrons interact with the atoms that make up the sample producing signals that contain information about the sample’s surface topography, composition, and other properties such as electrical conductivity.

The types of signals produced by an SEM include secondary electrons, back-scattered electrons (BSE), characteristic X-rays, light (cathodoluminescence), specimen current and transmitted electrons. Secondary electron detectors are common in all SEMs, but it is rare that a singlemachine would havedetectors for allpossiblesignals. The signals result from interactions of the electron beam with atoms at or near the surface of the sample. In the most common or standard detection mode, secondary electron imaging or SEI, the SEM can produce very high-resolution images of a sample surface, revealing details less than 1 nm in size. Due to the very narrow electron beam, SEM micrographs have a large depth of field yielding a characteristic three dimensional appearance useful for understanding the surface structure of a sample.

Electron Microscope

An electron microscope is a type of microscope that uses a particle beamof electronstoilluminate a specimen and createa highly-magnified image. Electron microscopes have much greater resolving power than light microscopes that use electromagnetic radiation and can obtain much higher magnifications of up to 1 million times, while the best light microscopes are limited to magnifications of 1000 times. Both electron and light microscopes have resolution limitations, imposed by the wavelength of the radiation they use. The greater resolution and magnification of the electron microscope is because the de Broglie wavelength of an electron is much smallerthan that of a photon of visible light.

The electron microscope uses electrostatic and electromagnetic lenses in forming the image by controlling the electron beam to focus it at a specific plane relative to the specimen. This manner is similar to how a light microscope uses glass lenses to focus light on or through a specimen to form an image.