eChapters

Climate classification systems are ways of classifying the world’s climates. One purpose of climatic classification is to group together places with similar climatic characteristics. That means if an area or region is categorised under a particular climatic type, it possesses broadly uniform characteristics with respect to climate. Classifications have been based on climatic elements such as temperature and precipitation, which are measurable, and on differences in tree species, soil characteristics, topography, etc. The varied nature of earth’s surface and the many interactions that occur among atmospheric processes give every location on the earth a distinctive climate.

Although the delineation of distinct climates may seem likely a very straightforward job, establishing the criteria by which climates are delineated requires considerable subjectivity. There are many ways of classifying the climate depending on the user and the level of understanding of the climate system at a given time. Different regions of the same climate type constitute isoclimatic regions. Identification of isoclimates helps in the transfer of agro-technology and suggesting new cropping pattern. Climatic classification is based on two approaches, viz., generic or empirical approach and genetic approach. In the generic approach the classification is based on the observed climatic elements or their effects on the phenomena, usually vegetation or humankind. The genetic classification is based on climatic controls such as general circulation, net radiation and moisture fluxes.

The concept of climate classification was originally brought out to delineate natural vegetation, which is dependent on rainfall and temperature. Climate classification is unique tool to find out different climate types across the globe, out of which isoclimates or homoclimates can be traced out.

The climate of a particular place is the function of a number of factors such as latitude and its influence on solar radiation received, air mass influences, location of global high and low pressure zones, heat exchange from ocean currents, distribution of mountain barriers, pattern of prevailing winds, distribution of land and sea, and altitude.

Meteorological hazards are severe and extreme weather and climate events that occur in all parts of the world, although some regions are more vulnerable to certain hazards than others. Meteorological hazards include cyclones, droughts, floods, hurricanes, hailstorms, heat waves and tornadoes. The hazard is distinguished from an extreme event and a disaster. An extreme event is simply an unusual event; it does not necessarily cause harm. A disaster is an event that does cause harm in significant amounts. Meteorological hazards are often called as natural hazards. The natural hazards become natural disasters when people’s lives and livelihoods are destroyed.

Hydrological hazards are the result of either excess or a severe lack of water, i.e., flood or drought. Hydrometeorological hazard is a process or phenomenon of atmospheric, hydrological or oceanographic nature that may cause loss of life, injury or other health impacts, property damage, loss of livelihoods and services, social and economic disruption, or environmental damage. Human and material losses caused by natural disasters are a major obstacle to sustainable development. By issuing accurate forecasts and warnings in a form that is readily understood and by educating people about how to prepare against such hazards, before they become disasters, lives and property can be protected.

Evapotranspiration is the combination of two separate processes named evaporation and transpiration. Evaporation accounts for the movement of water to the air from sources such as the waterbodies and soil. Transpiration accounts for the movement of water within a plant and the subsequent loss of water as vapour through stomata in its leaves. So evapotranspiration is a bio-physical process.

Evaporation

The change of state of water from liquid to the vapour and its diffusion into the atmosphere is referred to as evaporation. During evaporation, water molecules absorb energy which gives them the motion required to escape from the surface of liquid and become a gas. Since a certain amount of energy is consumed in the process of evaporation, the remaining liquid is cooled by an equivalent amount. Thus, the process of evaporation is always accompanied by a cooling effect.

As evaporation proceeds, the surrounding air becomes gradually saturated with water vapour and the process will slow down and might stop if the wet air is not transferred to the atmosphere. The replacement of the saturated air with drier air depends greatly on wind speed. Hence, solar radiation, air temperature, air humidity and wind speed are meteorological parameters to be considered when assessing the evaporation process.

In agrometeorology, evaporation is defined as the maximum possible loss of moisture from a wet, horizontal, flat surface exposed to weather parameters, which exist in the vicinity of plants. Evaporation is an essential part of the water cycle. It is the primary pathway through which water moves from the liquid state back into the water cycle as atmospheric water vapour. The oceans, seas, lakes and rivers provide nearly 90 per cent of the moisture in the atmosphere via evaporation, with the remaining 10 per cent being contributed by plant transpiration. A very small amount of water vapour enters the atmosphere through sublimation, the process by which water changes from a solid (ice or snow) state to a gaseous one, bypassing the liquid phase.

The word ‘monsoon’ is derived from the Arabic word mawsim meaning season. The Arabs during their travel towards India recognised that by June strong southwesterly winds commence over the Arabian Sea and bring a lot of rains to the subcontinent. The term was first used in English in British India and neighbouring countries to refer to the big seasonal winds blowing from the Bay of Bengal and Arabian Sea in the southwest bringing heavy rainfall to the area. In the Indian subcontinent, monsoon is one of the oldest weather observations, an economically important weather pattern over June through September every year, and the most anticipated weather event and unique weather phenomenon. Due to its effects on agriculture, flora and fauna, and other economic, social, and environmental effects, a monsoon is one of the most anticipated, followed and studied weather phenomena of the Indian subcontinent. It has significant impact on the overall well-being of subcontinent residents.

The term ‘monsoon’ is customarily used in India to refer to the rainy season during the northern hemisphere summer from June to September and is traditionally defined as a seasonal reversing wind accompanied by corresponding changes in precipitation, but is now used to describe seasonal changes in atmospheric circulation and precipitation associated with the asymmetric heating of land and sea. Now the term monsoon has been broadened to include almost all of the phenomena associated with the annual weather cycle within the tropical and subtropical land regions of the earth.

Precipitation is water in liquid or solid forms, falling on to the earth. In other words, precipitation is the deposition of atmospheric moisture on earth. Formation of clouds does not mean precipitation. Precipitation involves condensation, growth of hygroscopic nuclei, cooling of nuclei at different stages and their fall on to the earth’s surface. There may be several clouds but no precipitation. If the cloud particles are too small and remain suspended in the sky, they may not fall on the earth. Under certain conditions, water particles formed tend to fall but do not reach the surface since they get evaporated on the way. Only when the cloud droplets or ice crystals grow to certain size and can no more remain floating due to buoyancy of air, do they fall as precipitation.

Precipitation is the major source of water to all the living organisms on the earth. All the water sources on the earth depend on precipitation only.

Forms of precipitation

Precipitation form is the state that the moisture is in, i.e., liquid, freezing, or frozen (solid). Different forms of precipitation may occur together, such as mixed rain and snow; but such an occurrence is simply a mixture of forms, not a separate form of precipitation. Because atmospheric conditions vary greatly both geographically and seasonally, several different forms of precipitation are possible. All forms of precipitation are collectively termed hydrometeors. Hydrometeors have been classified into 50 specific types. Out of these precipitation forms, only rain (liquid form) and snow (solid form) make significant contribution to total precipitation. In many parts of the world, the term rainfall is used interchangeably with precipitation.

Clouds are visible mass of little drops of water or frozen crystals suspended in the atmosphere above the surface of the earth. The World Meteorological Organisation defined cloud as a visible aggregate of minute particles of water or ice or both, in the free air. This aggregate may include larger particles of water or ice and particles such as those present in fumes, smoke or dust.

Clouds are the most important form of suspended water droplets caused by condensation. The typical size of these water droplets and ice crystals range from less than 1 μm to 50 μm. When surrounded by billions of other droplets or crystals, they become visible as clouds. In the atmosphere sufficient moisture is required to allow condensation to take place. Then, moisture needs a suitable surface upon which it can condense. In free air, condensation begins on hygroscopic nuclei such as aerosols. These are microscopic particles and include dust, smoke, salts and chemical compounds. Nuclei range in size from 0.001 μm radius to over 10 μm. On an average, oceanic air contains one million condensation nuclei per litre and land air holds some 5 or 6 millions. On hygroscopic particles such as sea salts, condensation can begin before the air is saturated. Supersaturation in clouds rarely exceeds one per cent. On an average, clouds contain only four per cent of the total water in the atmosphere at any one time. Almost all clouds exist in the troposphere, although the tops of some severe thunderstorms occasionally extend to the stratosphere. Clouds move along with the wind and remain stationary in calm winds. They grow vertically and horizontally, depending on the temperature of the cloud and its ambient temperature. They may dissipate or precipitate. Under favourable atmospheric conditions, they burst and fall as rain.

Water vapour changes to the liquid water through condensation process. Condensation is the direct cause of the various forms of precipitation. It occurs as a result of changes in air volume, temperature, pressure or humidity. Water vapour can also be converted directly into the solid form through a process called sublimation. The latent heat expended in evaporation is liberated in the process of condensation. Four mechanisms may lead to condensation.

Water is the only substance that exists in the atmosphere in all the three phases, i.e., solid, liquid and gas. The moisture on the earth’s surface is in a constant phase change. The moisture content of the atmosphere is about 0.035% of all fresh water. The atmosphere receives its supply of moisture from the earth’s surface through evaporation from oceans, lakes, rivers, damp soil, etc. and through transpiration from vegetation. Water vapour is the gaseous state of water and is invisible.

The amount of water vapour present in the atmosphere is called atmospheric moisture or humidity. It is a measure of the amount of water vapour dissolved in the air, not including any liquid water or ice falling through the air. While humidity itself is a climate variable, it also interacts strongly with other climate variables. The humidity is affected by winds and by rainfall. Moisture content is determined by the local rate of evaporation, air temperature and the horizontal transport of moisture. Humidity indicates the likelihood of precipitation, dew or fog. It also plays a major role in the heat budget and the weather phenomenon of the atmosphere.

A big layer of air called the atmosphere surrounds the earth. The air within this layer moves from place to place when it warms up or cools down. This moving air is known as wind. In other words, air in motion is called wind. Winds move moisture and heat around the world and also produce much of our weather.

The strength of the wind can vary enormously. Sometimes air moves slowly and the wind is barely noticeable. When the weather is clear there may be a gentle breeze. When the wind is still very light, but it can be felt and there may be rustlings by leaves. At other times, the air can move very quickly and become a gale or hurricane, blowing down trees and damaging electric poles and buildings.

Winds are part of a global air circulation system that acts to balance temperature and pressure around the world. Different parts of the world receive different amounts of heat from the sun. This differential heating in turn results in differences in temperature and air pressure around the world, which drives the world’s winds.

As equatorial areas are heated most, the air above them warms and rises as it becomes lighter than the surrounding air, causing an area of low pressure. In cooler areas, the air sinks because it is heavier and results in an area of high pressure. Winds will blow as air is squashed out by the sinking cold air and drawn in under the rising warm air. Any difference in temperature like this will always cause a difference in air pressure, and therefore winds will blow. These movements result in a global wind pattern, with air moving between different areas around the world and also at different heights in the atmosphere. Colder air from the poles tends to sink and move towards the equator closer to the surface of the earth. In contrast, warm air from the equator rises and moves towards the poles high in the atmosphere because it is lighter.

Atmospheric pressure is the force per unit area exerted on a surface by the weight of air above that surface in the atmosphere of earth. The gas molecules of the atmosphere are pulled towards the earth by the force of gravity and hence exert a force on earth surface. In most circumstances atmospheric pressure is closely approximated by the hydrostatic pressure caused by the weight of air above the measurement point. Atmospheric pressure influences other weather elements in a significant way. Small changes in air pressure may not be felt, but they are important for bringing a change in weather. Atmospheric pressure can be calculated as the summed weight of all gas molecules between a horizontal plane and top of the atmosphere and divided by the area of the plane. Low pressure areas have less atmospheric mass above their location, whereas high pressure areas have more atmospheric mass above their location.

Measurement of atmospheric pressure

The standard unit of pressure in the SI system is the Pascal which is the name given to one Newton per square metre (N/m²). For meteorological purposes, standard sea-level pressure is 101325 pascal (Pa). To simplify this large number, the millibar unit (mb) has been adopted, which is equal to 100 pascals. Units like kiloPascal (kPa) or hectoPascal (hPa) are also used to measure pressure. 1 kiloPascal is equal to 10 millibars and 1 hPa is 1 millibar. The standard sea-level pressure is represented as 1013.2 mb or hPa.

Soil temperature is an important environmental parameter for plant growth and development. It has direct effects on microbial growth and development, organic matter decay, seed germination, root development, and water and nutrient absorption by roots. In general, the higher the temperature the faster these processes occur. Variation in soil temperature is much more pronounced because of varying characteristics and composition of soil.

The soil gains heat by absorption of solar radiation and longwave counter radiation from the atmosphere, downward transfer of sensible heat and horizontal transfer of heat from the surroundings. On the other hand, soil loses heat by longwave radiation to the atmosphere, upward transfer of sensible heat to air when the soil surface is hotter than air and with evaporation and horizontal transfer of heat from the column to surroundings.

Temperature is the physical property of an object that quantitatively expresses the hotness or coldness. Objects of low temperature are cold, while various degrees of higher temperatures are referred to as warm or hot. When a heat transfer path between them is open, heat spontaneously flows from bodies of a higher temperature to bodies of lower temperature. If no net heat flow occurs between two objects, the objects have the same temperature which are then said to be in ‘thermal equilibrium’. Temperature plays an important role in all fields of natural and applied sciences. Most of the weather parameters are dependent on it, directly or indirectly. It has important role to play in the development and growth of all living organisms in all stages of their growth.

Atmosphere receives the heat energy from the sun and its temperature increases. Due to different amount of heat energy receipt at different places, the air temperatures at different places also vary. The variation in air temperature basically results into air motion, so as to equalise the energy content of the different regions of the earth. Thus, atmospheric temperature is one of the basic elements of weather and climate.

Sun is the prime source of energy injected into the earth’s atmosphere. The sun is the nearest star to the earth. It is a hot ball of glowing gases at the heart of the solar system. Its radiant energy is practically the only energy source to the earth. Very small and insignificant quantities of energy are available from other sources such as the interior of the earth, the moon, and other stars. Without the sun’s intense energy and heat, there would be no life on earth.

The mean distance of the sun from the earth, also known as one astronomical unit (1 AU), is approximately 1.496 × 10⁸ km, though the distance varies as the earth revolves round the sun in an elliptical orbit. At this average distance, light travels from the sun to earth in about 8 minutes and 19 seconds. The energy of the sunlight supports almost all life on earth by photosynthesis, and drives earth’s climate and weather. The minimum sun-earth distance is about 0.983 AU and the maximum is approximately 1.017 AU. The earth is at its closest point to the sun (perihelion) on around January 3 and at its farthest point (aphelion) on around July 4.

The sun makes up about 99.86% of the mass of the entire solar system. The visible disk or photosphere has a radius of 6.599 × 10⁵ km, and the solar mass is 1.989 × 10³⁰ kg. The sun is a completely gaseous body. The chemical composition (by mass) of the outer layers of sun is 71 per cent hydrogen, 26.5 per cent helium, and 2.5 per cent heavier elements like oxygen, carbon, neon, and iron among others. Since the sun is not a solid body, different parts of the sun rotate at different rates. At the equator, the sun spins once about every 25 earth days, but at its poles the sun rotates once on its axis every 36 days.

The gaseous envelope surrounding the earth is called atmosphere. Thus, atmosphere can be defined as the dynamic layer surrounding the earth above its surface containing various gases, moisture, aerosols, etc. The atmosphere is retained by earth’s gravity.

The atmosphere protects life on earth by absorbing ultraviolet solar radiation, warming the earth’s surface through heat retention and reducing temperature extremes between day and night. The common name given to the atmospheric gases used in breathing and photosynthesis is air. The atmosphere has a mass of about 5.15 × 10¹⁸ kg, three quarters of which is within about 11 km from the surface. The atmosphere becomes thinner and thinner with increasing altitude, with no definite boundary between the atmosphere and outer space. The imaginary ‘Karman line’ lies at an altitude of 100 km above the mean sea level, and commonly represents the boundary between the earth’s atmosphere and outer space. The study of earth’s atmosphere and its processes is called atmospheric science or ‘aerology’. The atmosphere serves the life-system on the earth by the following activities.

Meteorology is derived from the Greek word meteoro which means above the earth’s surface; i.e., the atmosphere. The state of the atmosphere experienced at a given time, in any location on the surface of the earth is known as weather. Thus meteorology is the scientific study of the atmosphere or the weather. It is a branch of physics dealing with atmosphere and it is often quoted as the ‘physics of the lower atmosphere’. The main focus of meteorology is to understand the weather processes and forecast the weather. Solar radiation, the air mass and moisture are the three key ingredients that make up weather. The exchange of heat, moisture and momentum between the earth’s surface and the atmosphere determines the characteristic of weather. The observable weather events are known as meteorological phenomena and are defined by a set of variables called weather elements. Atmospheric temperature, atmospheric pressure, humidity, precipitation, cloudiness, wind and visibility, etc. are examples of such weather elements. The weather elements are not separate entities. They are closely related with each other and are highly variable in nature. Meteorology explains and analyses the changes of these weather elements.

Meteorology

The major subdivisions of meteorology are dynamic meteorology (or atmospheric dynamics) and physical meteorology (or atmospheric physics). The dynamic meteorology is concerned with the analysis and interpretation of the three-dimensional, time-varying, macro scale motions and energy transformations in the atmosphere. The science of dynamic meteorology is meant to develop models based on the hydrodynamic and thermodynamic equations. The physical meteorology is concerned with the processes that alter the physical properties and the chemical composition of air parcels as they move through the atmosphere.

ABSTRACT

Serious infections caused by bacteria that have become resistant to commonly used antibiotics have become a major global healthcare problem in the 21^st century. Antibiotic resistance, initially a problem of the hospital setting associated with an increased number of hospitals acquired infections usually in critically ill and immuno-suppressed patients, has now extended into the community causing severe infections difficult to diagnose and treat. In hospitals, most common resistant bacteria include methicillin-resistant Staphylococcus aureus, vancomycin-resistant enterococci and gram-negative rods including Enterobacteriaceae and Pseudomonas aeruginosa. Vancomycin intermediate and resistant S. aureus, represent a new treatment challenge. In the community, penicillin and macrolide-resistant pneumococci developed several decades ago and are now present all over the world. More recently, communityacquired methicillin-resistant S. aureus has become a problem in several countries causing skin infections but also severe diseases. The molecular mechanisms by which bacteria have become resistant to antibiotics are diverse and complex. Bacteria have developed resistance to all different classes of antibiotics discovered to date. The most frequent type of resistance is acquired and transmitted horizontally via the conjugation of a plasmid. In recent times new mechanisms of resistance have resulted in the simultaneous development of resistance to several antibiotic classes creating very dangerous multidrug-resistant (MDR) bacterial strains, some also known as ‘‘superbugs’’. In many cases the use of antibiotics is unnecessary or questionable. The indiscriminate and inappropriate use of antibiotics in outpatient clinics, hospitalized patients and in the food industry is the single largest factor leading to

ABSTRACT

Frankia is a gram-positive, microaerophilic, actinomycete that enters into symbiotic associations with a number of woody dicotyledonous plants called actinorhizal plants. Frankia can fix atmospheric nitrogen through such associations. The actinorhizal-Frankia association is beneficial for the environment, since it increases the fertility of soils. Extensive studies on the biochemical and molecular aspects helped in the classification of Frankia. PCR-RFLP studies of the 16S rRNA and the nif regions of Frankia revealed considerable information regarding the diversity of Frankia strains, isolated from different parts of the world. The completion of three whole genomes of Frankia has bolstered the study of the molecular organization of the genome. Comparative genomics study of the three complete genomes revealed that, the strains reflected the biogeographical history of the host plants they infected. Striking similarity in the codon usage patterns highlights the fact that they may have evolved as a unit. In the present review we highlighted the taxonomy of Frankia and the host plants, the Frankia-actinorhizal association, regulation of infectivity, biochemical and molecular characterization, phylogeny and genomics of Frankia and stressed the need for metabolomic study of the Frankia-actinorhizal association.

ABSTRACT

The continuing depletion of the stratospheric ozone layer mainly due to release of man-made atmospheric pollutants such as chlorofluorocarbons (CFCs) have resulted in the increase of solar ultraviolet-B radiation (UV-B; 280-315 nm) reaching to the Earth’s surface. UV-B is a small (less than 1% of total energy) but highly active component of the solar spectrum that can penetrate to biologically significant depths in lakes, ponds, rivers and oceans. It has been demonstrated that UV-B can cause wide ranging effects including mutagenesis, destruction of proteins/enzymes, inhibition of a number of vital metabolic processes and formation of thymine dimers in DNA leading to death of a number of organisms. A number of microbes including strict photoautotrophs always grow in lighted habitats and thereby always sense and face the stress of solar UV-B radiation. Similarly, humans are also exposed to varying levels of UV-B radiation depending upon the altitudes and latitudes of the location. A wide ranging effect of UV-B such as cataracts, skin cancer, immunosupression etc. has been reported in human. Damaging effects of increased UV-B radiation has also been shown in a number of microbes. These effects include inhibition of growth and survival, decrease in photosynthetic pigments, loss of PS II and RuBISCO activity, inactivation of nitrogenase enzyme and inhibitory effects on several other metabolic processes. Among photosynthetic pigments, phycobiliproteins seem to be the primary target of action since phycobilisomes are completely disintegrated after UV-B exposure. In this contribution an attempt has been made to put in perspective the main effects of UV-B radiation on microbes and human health.

ABSTRACT

Heavy metal contaminated soils are biologically inactive and extremely poor in soil fertility status. These metals are highly resistant and cannot be easily degraded by either chemical reactions or amendments. Microorganisms are biological softwares capable of degrading the metals efficiently. Among microorganisms, mycorrhizas are known to circumvent metal toxicities through a series of processes that assist in immobilization in biological systems which converts toxic metals into less or nontoxic forms. There are five mechanisms such as biosorption, solubilization, hyphal transport, detoxification and dilution are involved in promoting tolerance of host plants to heavy metal toxicities. These processes are strategies that can be exploited to phytoremediate the contaminated soils. The phytoremediation strategies encompass tolerance of mycorrhizal fungi, phytostabilization (preventing entry of heavy metals into plants), phytoextraction (luxuriant uptake and transport to shoots) and intercropping or crop rotation with mycorrhizal dependent hyperaccumulators or non-hyperaccumulators. Despite mycorrhizas are natural, the indigenous population is not sufficient enough to induce tolerance of host plants to abiotic and biotic stress conditions. This necessitates adopting recommended agronomic practices to promote mycorrhizal colonization in natural agro-ecosystem or to derive full benefits from phytoremediation strategies. Thus mycorrhizas are important naturally occurring microorganisms capable of withstanding highly contaminated metal sites and offer protection against phytotoxicities caused by heavy metals.

ABSTRACT

Plasmids are circular, double-stranded DNA molecules which replicate autonomously from the chromosome of the host organism. Plasmids are found in many bacterial species and often confer upon the host cell phenotypic characteristics such as resistance to antibiotics, resistance to heavy metals, ability to produce particular protiens, conjugative (mating) ability and ability to degrade xenobiotc compounds. One of these degradative plasmids may encode a complete catabolic pathway (such as toluene to pyruvate, formate and acetaldehyde) or partial degradative steps, such as octane to octanol. In this later case, the remainder of the pathway may be encoded by chromosomal genes, by genes of other plasmid present in the host, or by other microorganisms. Many degradative plasmids possess a broad host range, especially among the gram-negative bacterial species.

There are different mechanisms which may be involved in the evolution of aromatic pathways in general and in the process of adaptation of microorganisms to xenobiotic substrates in particular. Gene transfer, the occurrence of plasmids in bacteria in the natural environment is an important pool of genetic information residing on plasmid vehicles may flow among indigenous microorganisms. Since many examples of self-transmissible plasmids that carry genes for degradation of aromatic or other xenobiotic compounds are known, and their role in spreading these genes to other microorganisms is well characterized. Early, studies of TOL, NAH, and SAL plasmids revealed strong homologies among these plasmids in regions both inside and outside the catabolic gene clusters. Plasmids, pJP4, pAC25, and PSS50, catabolic plasmids carrying genes for chloroaromatic degradation, have strongly homologous plasmid backbone that determine replication and transfer function. Furthermore, the chlorobenzoate plasmid p51 was also shown to be homologous to pJP4 outside regions of the catabolic genes. These observations suggest that a few common self-transmissible ancestor replicons (includes origin of replication and replication gene) may have been involved in acquisition and spread of different catabolic genes. DNA

ABSTRACT

An understanding of the metabolism of heavy metals facilitates biotechnological use of these functions just recently, although heavy metals comprise the major part of the elements in the periodic table. Due to their ability to form complex compounds, some heavy metals are essential trace elements. In any case, essential or not, most heavy metals are toxic at higher concentration. Heavy metal pollution from last few decades has led to an increased environmental concern. Heavy metal like cadmium is a non-essential toxic heavy metal and is also being increased in soil during last few years posing a serious threat to environment and human health worldwide. Therefore, remediation strategies of the contaminated sites are great concerns and can be achieved by a number of different physico-chemical and biological means.

ABSTRACT

Industrial and agricultural activities and the disposal of waste products have resulted in the contamination of many terrestrial environments. Industrial effluents often contain considerable amount of potentially toxic compounds such as Cd, As, Pb and Hg. Due to their small size, which provides a large contact area that can interact with the surrounding environment, microorganisms are the first biota showing the impact of toxic compounds. Microorganisms being in intimate contact with the soil environment are considered to be the best indicators of soil pollution. In general, they are very sensitive to low concentrations of contaminants and provide a rapid response to soil perturbation. Rhizobium spp. are ubiquitous gram-negative soil bacteria that have a profound scientific and agronomic significance due to their ability to establish nitrogen-fixing symbiosis with legumes, which is of major importance to the maintenance of soil fertility and to feed livestock and populations in many developing countries. Therefore, the present work aimed to evaluate the impact of heavy metals on Rhizobium populations isolated from different locations contaminated with heavy metals. In order to reach this goal some physicochemical parameters that influence metal bioavailability were determined, as well as their concentrations in soil. Cadmium tolerance of Rhizobium isolates was screened in artificial media and the highest cadmium concentration allowing growth was defined as the maximum resistance level (MRL). The heavy metal tolerance variability found among Rhizobium isolates, suggests that beyond basic metabolic machinery also exist variations that allow isolates to display distinct tolerance responses to Cd stress. To better understand Rhizobium cadmium tolerance, wall-bound and intracellular Cd was determined. Sensitive and moderately tolerant isolates showed low intracellular Cd amounts when compared to extremely tolerant isolates, which were able to withstand intracellular Cd concentrations 40 times higher. Lipopolysaccharides (LPS) bind cations unspecifically, so they constitute the initial defence mechanism to heavy metals since they sequestrate cations and therefore prevent their entry into the cell. LPS quantity varied significantly between isolates. LPS increases were observed in most sensitive, moderately tolerant and tolerant isolates, evidencing an attempt of cells to adjust to cadmium entry. These results may be of great importance for understanding how Rhizobium persists in contaminated soils. They also provide important data to the development of bioremediation processes and to the improvement of soil productivity.

ABSTRACT

The world ocean with a coastline of approximately 3,50,000 km is the largest ecosystem on earth. Marine organisms are the major, sustaining components of ecosystem processes and are responsible for biogeochemical reactions that drive our climate changes. Despite this, many marine organisms are poorly described and little is known of broad spatial and temporal scale trends in their abundance and distribution. With new molecular and analytical techniques we can advance our knowledge of marine biodiversity at the species level to understand how marine biodiversity supports ecosystem structure, dynamics and resilience. We can then interpret environmental, ecological and evolutionary processes controlling and structuring marine ecosystem biodiversity. In biotechnology applications marine microbes represent a potential source for numerous commercially important biomolecules and their bioremediation capabilities are also remarkable. They also play a crucial role in decomposition of organic matter and cycling of nutrients. Microbes also serve as food for some bottom-living organisms. Understanding and preserving biodiversity was one of the most important global challenges for the past 20 years and will continue to be an important scientific issue into the new millennium. Our knowledge of marine microbial diversity has, however, been severely limited by relying on microorganisms that have been cultured which are less than 1%.

ABSTRACT

Endophytes are microorganisms that live inside the host plant tissues without causing symptoms of disease. There has been a crescent interest in the prospecting of these microorganisms as sources of novel and bioactive natural products. In fact, a significant number of interesting natural products have been reported in the last years. In this chapter some aspects regarding the endophytes are detailed: the relationship with their host plants, isolation, preservation, taxonomy, cultivation, frequently isolated strains, tropical endophytes, novel structures isolated and also their biological activities.

Key words: natural product, endophytic fungi, plant fungus interaction, secondary metabolites.

ABSTRACT

Soil borne fungal pathogen causing root diseases of vegetables are difficult to control by chemical methods. The existing biocontrol bacteria are not very effective in control of soil borne fungal pathogens. As such very less number of bacterial biopesticide is available commercially to control the fungal pathogens. Increasing concerns in recent years about human health and environmental problems due to chemical pesticides, couple with increasing pest resistant to chemical, have led to a reappraisal of our approach to control pest and disease in crops. The trends now are towards a management concept in which the best combination of tools is used to manage plant diseases below economic thresholds with minimal risk to human health and environment. The modern management concept includes extensive use of biocontrol agents which are harmless to non-target organisms. Development of effective technology for control of pest and disease by using microbial resources of a region to enhance the quality of ecosystem is a potential alternative approach to chemical control of plant diseases. In such strategy, search for microorganisms and biological system is an important prerequisite prior to development and practical exploitation of biocontrol. Rhizosphere microorganisms are shown to be perspective candidate for biocontrol agent as they provide the front line of defense for plant roots against the attack by various plant pathogens causing the most diseases of vegetables and crops. Chemical control of soil-borne fungal pathogen had been the subject of growing concern because of their adverse effect on the environment and emergence of chemical pesticide resistant to plant pathogen, moreover, soil borne pathogens are very difficult to control. Crop rotation, breeding for resistant plant varieties and application of pesticides are insufficient to control root diseases of important plants because they survive as sclerotia and has got wide host range.

ABSTRACT

Plant growth promoting (PGP) bacteria play an immense role in promoting crop growth mainly by direct mechanisms such as N_2-fixation, phosphate solubilization and phytohormone production and indirectly may help to suppress pathogens or contribute to enhance absorption of nutrients leading to increase yields. The N₂fixers are grouped based on their niche adaptation as endophytic nodular symbionts (Rhizobium spp.), free living (Azotobacter spp.), associative symbionts (Azospirillum spp.) and endophytic non-nodular symbionts (Azoarcus and Gluconacetobacter diazotrophicus). In the recent past, phosphate solubilizing and phytohormone synthesizing bacterial communities also gained momentum.

ABSTRACT

Methylotrophy is a phenomenon by which microorganisms derive energy, and in many cases, cell carbon from reduced molecules that have no C–C bond (also called C1compounds). This gains significance because of its unique mode of nutrition, the ability to utilize more than one metabolic pathway and its vast distribution among various groups of bacteria and yeasts. It is one of the earliest modes of energy metabolism present in microorganisms, through which microorganisms are able to utilize a wide range of compounds, which are considered unsuitable for most forms of life. In the present chapter we focus on various aspects of methylotrophy, and the application of methylotrophic bacteria in a spectrum of biological activities and commercial possibilities.

ABSTRACT

Biotransformation is an essential step in the elimination of drugs and reduction of their toxicity. The use of fungi in biotransformation reactions can provide information about the metabolism of new drugs and facilitate the attainment of necessary amount of metabolites for toxicological and pharmacological evaluation. Biotransformation studies require the right choice of the microorganisms and also of the culture conditions (pH, substrate, oxygen, salts, temperature, etc). The optimization of these procedures is essential to achieve good results. The fundamental aspects of drug biotransformation by fungi are discussed here as well as some applications showing that many fungi are used in biotransformation studies, mainly Cunninghamella species. Several species mimic the mammalian metabolism producing the same metabolites observed in humans.

ABSTRACT

A number of secondary metabolites are produced by cyanobacteria involving the non-ribosomal peptide biosynthetic pathway. Some of these compounds have potential biotechnological applications, whereas others (the cyanotoxins) are undesired due to their toxicity to animals. The occurrence of toxic cyanobacterial blooms in freshwater bodies that are used as source for human consumption, recreation and irrigation are frequent nowadays due to increasing artificial eutrophication of these environments. It is important to monitor toxin-producing strains in order to prevent the adverse effects caused by their toxins to human and animal health. Thus, the development of rapid and sensitive methods for the detection of cyanotoxins is important as they could be useful to monitor water supplies and contribute for watershed monitoring strategies. Current methods include cell counting, microscopic identification and toxin analysis by biochemical and analytical techniques. However, in recent years, molecular biology techniques, such as polymerase chain reaction (PCR), have been used to amplify specific regions within biosynthetic genes for rapid and sensitive identification of toxic cyanobacteria. The aim of this chapter is to provide an update of cyanotoxin biosynthesis and discuss the advances and limitations of molecular biology regarding its application as indicative of cyanotoxin production.

ABSTRACT

Bioinformatics is a critical tool in designing the molecular biology experiments. The xeroxing of specific part of genome needs correct primer designing. Primer designing has central role in molecular biology right from cloning, sequencing, gene expression profiling by real time PCR, genotyping by RFLP, SNP analysis by real time PCR and auto sequencer. In this chapter we are describing how to proceed for experimental designing right from data mining from GENEBANK to designing of primers for various common molecular genetic analysis work. The write up also describes in silico evaluation of primers, various off line commercial and non-commercial software, on line free software and trouble shootings in primer designing, The different strategy described in context of primer designing would be of immense use of researchers.

A Patent is a written document explaining an invention with exclusive right. It is used to protect an inventor/scientist and to prevent other from making profits without permission. It is also used as an authority paper permitting license holders to duplicate the results. A patent application requires a combination of legal documentation and technical papers. This issue makes patent writing a very different writing style.

In India, patent applications can be filed by a patent agent or an individual having some scientific and technical background to understand the invention. However, no one can understand the invention better than the inventors themselves. Document preparation requires healthy discussions between the inventor and agent. For inventors, a good understanding on patent writing style can greatly facilitate the documentation process. Before filing the patent application inventor must be sure about that the subject is eligible for patent protection, the invention has something new, the invention is not obvious and is not easily predictable from general consensus, and the invention has practical application.

Keeping in view the importance of intellectual property rights and their protection, Journal of Intellectual Property Rights (JIPR) was started in 1996. The objective of the journal is enhancing communication between policy makers, organizational agents, academics, and managers on the critical understanding and research on intellectual property; and to promote the development of the newly cultivated research field. The journal publishes contributed/invited articles, case studies and patent reviews; technical notes on current IPR issues; literature review; world literature on IPR; national and international IPR news, book reviews, and conference reports.

JIPR is covered in the abstracting/ indexing services namely Scopus, EBSCO host Electronic Journals Service, Directory of Open Access Journal, Library & Information Science Abstracts database and Legal information Institute of India database.

World Intellectual Property Organization

http://www.wipo.int,http://www.wipo.org

The World Intellectual Property Organization - referred to in abbreviated form as WIPO in English, and OMPI in French and Spanish - was established by a convention signed at Stockholm on July 14, 1967, and entitled “Convention Establishing the World Intellectual Property Organization.” The WIPO Convention entered into force in 1970. WIPO became a specialized agency in the United Nations system of organizations in 1974 and dedicated to the use of intellectual property (patents, copyright, trademarks, designs, etc.) as a means of stimulating innovation and creativity.

WIPO promote the development and use of the international IP system through Services, Law, Infrastructure and Development.

Abstract

Describes the genesis, organization and Internet representation of International Patent Classification (IPC). Provides the outline of seventh edition and useful URLs related to it.

Keywords: International Patent Classification, Patent Classification, Classification, Internet representation

Introduction

The International Patent Classification, commonly known as the IPC, is based on an international multi-lateral treaty administered by World Intellectual Property Organization (WIPO). This treaty is called the Strasbourg Agreement concerning the IPC, which was concluded in 1971 and came into force on October 7, 1975. The Agreement aimed to overcome the difficulties caused by using diverse national patent classification system. The common classification system defined by the Agreement is applied to patent and utility model documents. The Agreement is open to States party to the Paris Convention for the Protection of Industrial Property.

Abstract

Patent is a monopoly right which is granted by the Government to the applicant for the full disclosure of an ‘invention’ which is ‘new’, ‘inventive’ and ‘industrially applicable’. Thus, before filing a patent application, the inventor must be sure that the work done by him is new and inventive. Further, during the examination of the patent application, it is required to be verified that the invention claimed in the disclosure/specification is new, inventive and industrially applicable. Since the search for the ‘Novelty’ of the invention is carried worldwide, it becomes all the more important for the inventor and the examiners to search for the prior art thoroughly. Searching for the prior art (i.e. state of the art) across the globe in around millions of documents both patents and non-patent documents, is like ‘searching a needle in the haystack’. However, by using proper keywords and classification techniques, it is possible to arrive at the closest prior art available. Each patent application is classified by the Indian Patent Office and thus attributed to one or several fields of technology. The classification scheme applied is the International Patent Classification (IPC).

Abstract

Patent infringement is the act of unauthorized making, using, offering for sale or selling any patented invention within the India. In case of patent infringement it is necessary for the patentee to compare the claims granted to him with the allegedly infringing product an check whether there is an infringement – whether the infringing product falls within the scope of the claims of the patent. In such a case the patentee may sue for relief in an appropriate court. The patentee may ask for permanent injunction and damages on account of the infringement. It is the crusade of the inventor asserting his rights against an infringer and the law recognizes the importance of this right; because, without such positive and assertive rights, industrial progress would be hard to come by

“Necessity is the mother of invention”, all of us must have heard this statement at some juncture in our lives. Most of us may even have even gone through the motion of inventing something when needed. However, more and more inventions happening today may not necessarily be necessities. These inventions definitely perform the task of improvingand making convenient our overall living environment. Past few years have seen an increasing awareness and understanding in the field of intellectual property. Among all aspects, one aspect of intellectual property that is gaining increasing attention of intellectual property owners is management of the intellectual property rights.

This brings to our minds one question, how was intellectual property management practised by early mankind? We all do know that early mankind has left no stone unturned to make theabove statement”Necessity is the mother of invention”, a reality. Mankind prospered by leaps and bounds on account of sharing their various discoveries and inventions. Way back then knowledge was meant to be shared, as aptly captured in the Sanskrit Sloka:

Introduction

In the perspective of the accelerating national growth rate of 8% recorded at the end of the 10th Plan to a projected growth rate of 10% by the end of the 11th Plan, yielding an average GDP growth rate of about 9% it was appearing that the nation is going to have a strong footing of development. However, it could not be fully achieved due to several reasons including the global recession and other factors related to international economic setback which may deter achieving a projected growth rate of 10% in the 12th Plan. In consideration of the international scenario of growing complicacy in economic growth more emphasis should be given on further efficient utilization of natural resources and intellectual properties of grass root innovators to improve per capita income leading to a promising national structure of economics ensuring wide spread benefits to the society. In this regard, true development of a nation like India can be primarily realized by recognition of wide spread enthusiasm of its innovative human resources living in village and rural areas. It can be made possible only through working with them by appreciating their struggle for survival using all round innovative measures coming out of their daily life experiences and traditional knowledge. Technopreneur Promotion Programme (TePP) is a unique scheme of Government of India for development of society especially by promoting the intellectual properties of grass- root level innovators coming out from the society with a source of inspiration arising out of their daily life struggle for existence. In spite of its limited publicity in remote areas an awareness of this programme has often been found to raise great hope to the villagers to do something for their society exploring the ideas generated from the experiences of life with the help of local resources. Such naturally grown innovation can be found undoubtedly novel and the idea can change their world of dreaming for a more prosperous life by bringing changes in socioeconomic pattern of trade and employment in rural areas with proper support from Government if India through the scheme like TePP.

Abstract

The paper discusses patentability aspect of subject matter. Patentable subject matter must satisfy three basic criteria i.e. novelty, inventiveness and industrial applicability, though few subject matter satisfying all the three basic criteria stated above may still be not patentable in specific jurisdiction based on certain circumstances or as stated in the patent act of the specified jurisdiction. Therefore grant of a patent is subject to certain limitations mentioned in the section 3 and 4 of the Indian Patent Act for Indian jurisdiction. The aim of this paper is to study such limitations in detail.

Abstract

An intellectual property infringement is the violation of an intellectual property right of the owner. Infringement is established based on the law governing appropriate IPR in the concerned country. Both civil and criminal remedies are available under the concerned law. The present paper introduces the patent infringement as per Indian Patent Act, 1970. It discusses various modes and types of infringements which can take place. It further discusses a procedure to formulate opinion about product infringing a granted patent. In the end some usual defenses against patent infringements have been discussed. Some case studies have also been presented along with the damages awarded for the patent infringement.

The main purpose of this lecture note is to provide basic information on patent drafting skills and train applicants for drafting a patent in clear and concise manner.

We will see the components of Complete Specification through the following Case studey (1) of a solar water heater. The figures are provided below for reference and better understanding.

Technology transfer is an important commercial tool for leveraging and optimizing the value of intangible assets in the present era of globalization which has deepen the process of integration of the economic resources including the free movement of goods, merchandise, services, capital and intellectual property rights. This economic integration is facilitated by a legal framework of World Trade Organization (WTO) under various agreements including the Trade Related Aspects of Intellectual Property Rights (TRIPS). There are other International Institutions i.e., World Intellectual Property Organization (WIPO), World Customs Organizations (WCO) and United Nations Conference on Trade and Development (UNCTAD) to regulate and provide guidance for the protection and enforcement of IPRs. The present global economy is geared and triggered by knowledge and almost 80 % of the global wealth comes from knowledge based intangible assets and helps optimization of the limited global resources. Technology transfer is a tool for leveraging the value of IPRs and also for sharing knowledge around the world. Knowledge is weightless and in today’s era, knowledge is driven by Information and Communication Technology (ICT) which adds to productivity in all aspects of economic life.

The term “Technology transfer” broadly connotes transfer of knowledge from one legal entity to another legal entity within and outside the national territories of the legal owner of the Patent holder at a consideration, known as license fees or technical fees or royalty. This may happen as a part of Foreign Direct Investment (FDI) or as a part of pure technological collaboration. In other words, Transfer of Technology (TOT) and Technology Commercialization allows the transfer of the technology by a patent holder to a user for further development and exploitation of the technology into new products, processes, applications, material or services. Patent provides an exclusive right to the patentee to exclude others from using an invention without his consent and the technology transfer is the process to include the licensee as the legal user without infringing the rights of the patentee. The exclusive right granted to a patentee is the right to prevent others from making, using, selling, or distributing the patented invention without his permission. The technology transfer allows the user to use the patented technology with the consent of the patent holder.

Abstract

The main aim of the article is to identify the strengths, weaknesses, opportunities and threats of current IPR system in context to Indian regime and also to understand overall planning as well as important tactics and means to use IP legal protection system to fully safeguard one’s legitimate rights and interests, obtain and maintain competitive edges, restrain competitors and seek optimal economic performance by selection of appropriate IP strategies. This article also proposes ways to select IP strategy based on BCG matrix and product mix.

Introduction

‘IP’ refers to unique, value-adding creations of the human intellect that results from human ingenuity, creativity and inventiveness. An IP right is thus a legal right, which is based on the relevant national law encompassing that particular type of intellectual property right. Such a legal right comes into existence only when the requirements of the relevant IP law are met and, if required; it is granted or registered after following the prescribed procedure under that law. All countries around the world have a national legal system of intellectual property rights which has developed over varying periods of time during the last 150 years or so. It has enabled the grant of property-like rights over such new knowledge and creative expression of mankind, which has made it possible to harness the commercial value of the outputs of human inventiveness and creativity. This is usually done by its orderly use, exchange or sharing it amongst various types of business partners in a complex network of strategic relationships that generally work harmoniously during the new product development process for creating and marketing new and improved goods and services in domestic and export markets.

IPR is a tool for Innovation and reward for it. Innovations are concerned with the commercialization of new ideas; in contrast, an ‘invention’ may not be directly associated with commercialization. As such, innovation may be seen as a process of interaction and feedback during the various stages of the new product development process. An invention is considered as the generation of a new idea or knowledge, which aims to solve a specific technical problem. Inventions could relate to products or processes and are characteristically protected by trade secrets, utility models/petty patents or patents. Utility models/petty patents or patents are granted/registered under the relevant national/regional law by the relevant national or regional patent office. As not all inventions are commercialized, so it is clear that not all inventions result in innovations.

Abstract

The two most important tasks for a patentee to undertake after being granted a patent, in any patent regime, would be to pay the renewal fees necessary to keep the patent alive, and provide proof of having worked the patent in the jurisdiction. This article seeks to highlight features of India’s legal requirements with regard to the working of patents on a commercial scale. The number of patents granted in a country is an indicator of the technological strength of the country. However, it should be noted that actual technological growth depends upon the working of patents. Working of a patent means the commercial exploitation of the invention that is embodied in the patent.

Introduction

Social disinterestedness could be an anticipation that applies issues of amends and candor to policy. Aback the Sixties, the anticipation of amusing disinterestedness have been activated in an advance of institutional contexts, calm with apprenticeship and accessible administration. The anticipation of amusing disinterestedness is about afflicted aback to the works of philosopher and Plato. Definitions of amusing disinterestedness will vary, about all focus aloft the ethics of amends and fairness. Disinterestedness in fashionable societies involves the role of accessible directors, United Nations bureau breadth assemblage accountable for authoritative assertive that amusing casework breadth assemblage delivered equitably. This bureau demography into application actual and accepted inequalities a part of groups; candor relies on this amusing and actual context. Amusing and bread-and-butter bigotry has abiding furnishings on societies and as well the bloom of populations. The acceptance from an ample alter of disciplines breadth assemblage acclamation disinterestedness in avant-garde agency that. Solutions alter from acclamation cyber banking accretion aberration to apprenticeship quality, cyber banking action to bent amends reform and affluence of accession disinterestedness problems that anon and alongside accept an aftereffect on animal bloom and well-being. The aggregation seeks to acknowledgment such queries as, will a bigger pay advance superior of action measures, calm with health, nutrition, and ancestor’s circadian life? As added cities ahead hikes in their pay, this assay can acquaint approaching choices apropos the after-effects on staff, their families, employers, and as well the community. An administration of assets, resources, and liabilities a part of the individuals during a nation or association that’s advised accurate and simply. Whereas some accept that bread-and-butter disinterestedness needs that anybody voters pay an agnate quantity, others accept that the abundance paid care to wait aloft the abundance that every accountable will allow to pay while not disproportionate hardship. Put simply, disinterestedness is possession. Aural the affairs world, disinterestedness refers to stock. Aural the accounting and aggregation disposition world, disinterestedness (or added normally, shareholders’ equity) refers to the abundance of basic contributed by the abode owners or the acumen amid a company’s absolute assets and its absolute liabilities. The fashionable era is casual through an alluringly and annealed aggressive laissez-faire abridgement that’s about there’s no acknowledgment to actualize some individuals at an advantage while not creating others worse off. This cessation refutes the claims of ambitious bread-and-butter planners, United Nations bureau assert that markets breadth assemblage disorganized free-for-alls which centralized chief would be added economical. During a class disconnected association the advantages of amusing appear can’t be aggregate appropriately by the all categories of individuals. It’s simple to appetite agitated with the abstraction that markets appreciate appropriate and to again draw inappropriate abstracts apropos policy. It’s basic to arouse that authority is apropos a way to achieve goals; it doesn’t say something apropos what your goals care to be. Locution that the bazaar aftereffect is economical doesn’t beggarly that that aftereffect is about alluring for all the individuals. In fact, in some affairs analive action could advisedly baldest accessory bulk aftereffect that’s not economical.