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Mass selection is a form of selection in which individual plants are selected phenotypically and the next generation propagated from the aggregate of their seed. It is applicable to both self and cross-pollinated crops. The obvious first step in the improvement of self-pollinated variety is the elimination of undesirable types. This may be achieved by simply roguing them as the variety grows in the field. Sometimes, this is called as negative selection. Another approach is to tag desirable types and to harvest only those at maturity. This is called as positive selection. Either way, results are similar. The best plants in the variety are identified and bulked. A refinement of mass selection is to harvest the best plants separately and to grow them as pure lines for comparison. Only those pure lines that are similar and superior are bulked as an improvement of an established variety. 

Mass spectrometry (MS) is a powerful and versatile analytical technique through which mass of an atom, or a molecule is assessed. It helps for identification and structure elucidation of various complex compounds. The instrument used is known as Mass Spectrometer. It serves the purpose of qualitative identification, confirmation as well as the quantification of an atom or a molecule. MS identification is conclusive because the mass spectrum of each substance is unique. In general, MS instruments are composed of a sample inlet, an ionization source, a molecule accelerator, a detector, an amplifier, and a recorder (Figure 7.1)

Strategic partnerships and productive outreach play a crucial role for new technologies to successfully reach the market, drive growth, and strengthen a country’s global competitiveness, Outreach programs have various benefits, ranging from technology transfer awareness, communication of stakeholders, industry, government, to academy partnership promotions. These efforts help in establishing connections, communicating opportunities, and encouraging active engagement from key stakeholders. Outreach activities can be performed under two broad categories:
1. Written communication includes all communication which can be viewed, shared, or made accessible for a set of people in a passive manner. This includes reports, newsletters, guidance, and online content which provide insights of worth for stakeholders.
2. Human outreach includes all direct communication like c face-to-face or verbal form communication it included conferences, conventions, workshops, seminars and personal communication with industry leaders.
The type of outreach creates stronger, more personal connections. An effective outreach strategy usually combines both human and written outreach efforts. By following this strategy TTOs can expand and strengthen partnerships, and make it easier for research-led innovations to get transition from lab to market more effectively. This chapter explores key outreach models, strategic networking approaches, and proven practices for building impactful partnerships in technology transfer.

So far, we have seen the examples in which mode of inheritance of a particular character is tied to the behaviour of the nucleus or more specifically to the chromosomes. In other words, transmission of a character and its appearance in the individuals can be predicted from the knowledge of chromosome segregation and independent assortment. This analogy gets further strengthened on the ground that the DNA has been considered as the basic genetic material and practically all the cellular DNA is localized in the chromosomes. It has also been seen that DNA does not produce an organism alone but obviously depends upon an already existing medium in order to function. Thus, genotypic effects may considerably get modified by the environment. In the cell itself, one important source of environmental effect is the cytoplasm immediately surrounding the nucleus. The components of the cytoplasm may show wide variation between the individuals and therefore it cannot be ruled out that a genotype in one cytoplasm may function somewhat differently than the same genotype placed directly into another cytoplasm. It is well known fact that the cytoplasmic contribution of one of the parents in form of an egg is considerably larger than the cytoplasmic contribution of the other parent in form of sperm. For example, cross-fertilization between two strains capable of producing both sperm and eggs, leads to contribution of ‘A’ genotype and ‘a’ egg cytoplasm in one case and of ‘B’ genotype and ‘b’ egg cytoplasm in the other case. Thus, the cross-fertilized diploid zygotes have two possible genotypic-cytoplasmic combinations, namely, AB-a, and AB-b depending upon which strain provides the egg. If the egg is contributed by the A parent, then the genotype of the progeny shall be AB-a, and if the egg is contributed by the B parent, then the genotype of the progeny shall be AB-b. If each such cytoplasm produces a unique phenotype, then AB-b would have the same b phenotype as BB-b individuals. Such effects produced by the egg cytoplasm are termed as maternal effects.

Introduction

Measurement of pH of a solution and preparation of different types/strength of buffers are common practices in a laboratory, particularly in the Biochemistry and Molecular Biology laboratories. Therefore, in this chapter you will be acquainted with the procedures of measuring pH of a solution as well as preparation of some of the commonly used buffers in a laboratory.

Potential or Power of Hydrogen Ion (pH)

Measurement of pH of a solution is measuring the molar concentration of hydrogen ion [H+] in the solution, which is an indication of the acidity or basicity of the solution. The symbol pH stands for “power of hydrogen” and numerical value for pH is just the negative logarithm of the molar concentration of hydrogen ions [H+]. The ionic product of water (Kw ) is the basis for the pH scale. The total hydrogen ion concentration from all the sources and it can be experimentally measured.

The pH scale designates the concentration of H+ (and thus of OH−) in an aqueous solution, which ranges between 1.0 M H+ and 1.0 M OH−. The term pH is defined by the expression

Thus, the ionic product of water makes it possible to calculate the concentration of H+, with given concentration of OH−, and vice versa. The value of 7 for pH of a neutral solution is not an arbitrarily chosen figure; it is derived from the absolute value of the ionic product of water. A solution having pH greater than 7 is basic, and the concentration of OH− is greater than that of H+. A solution having a pH less than 7 is acidic.

A spectrophotometer is an analytical instrument that measures the absorbance of a test sample (solution). The term “spectroscopy” comes from the word “spectrum”. “Spectroscopy” therefore implies the use of multiple wavelengths of light. Spectrophotometers have the ability to specifically measure absorbance at specific wavelengths. The most commonly used method to allow this involves a “monochromator”, a device (either a prism, or more commonly, a diffraction grating) that splits the incident light into its component wavelengths, and allows only light of the desired wavelength to reach the sample. The ability to measure absorbance at different wavelengths is very useful, because the extinction coefficient of a compound varies with wavelength. In addition, the absorbance spectrum of a compound can vary depending on the chemical composition of the compound, and depending on the nature of the solvent around the compound.

Absorbance is a useful quantity and follows the Beer-Lambert law. The extinction coefficient of a molecule at a given wavelength can be calculated using the Beer-Lambert equation from absorbance measurements for solutions of known concentration, which states that:

5.1 Introduction

Phosphorus fertilization is a problem in acid soils due to the high fixation characteristics of these soils. Soluble phosphorus carriers such as triple super phosphate tend to get reverted into insoluble and slowly soluble forms, for e.g. iron and aluminium phosphates.  Some soils in Mauritius have been shown to fix up to 90% of applied phosphorus. The fixation characteristics as related to soil properties have been studied for some soils of Mauritius. Rock phosphate offers a good alternative or complement to triple super phosphate.  In volcanic soils of Chile it is recommended to apply rock phosphate in combination with triple super phosphate because of the high phosphorus-retention capacity of these soils.  However, in Western Australia it has been shown that rock phosphate response is low. Possible explanations are slow dissolution of rock phosphate due to the moderately acid pH (5.5 -6.5), low pH-buffering capacity, low calcium absorption in soil, which increases concentration of calcium in soil solution, and poor water holding capacity of these soils.

Hybrid technology is one of the options to boost crop productivity. Hybrids give more yield than improved varieties under optimum crop production conditions. Further, uniform size, earliness, better adaptability to adverse environments, better transportability due to better keeping quality and resistance to stresses are certain additional advantages of growing hybrids with better monetary return to the growers. Hence in coming years, hybrid technology has to go a long way in our country to meet the future challenges (Kalloo et al., 2000). Thus, it is pertinent to have an overview of the methods of the hybrid seed production technology. Various methods are as follows:

One of the most essential factors governing the growth and morphogenesis of plant tissues in culture is the composition of the culture medium. The basic nutrient requirements of cultured plant cells are very similar to those of whole plants. The basic nutritional requirements of cultured plant cells as well as plants are very similar. However, the nutritional composition varies according to the cells, tissues, organs and protoplasts and also with respect to particular plant species.  The appropriate composition of the medium largely determines the success of the culture. A wide variety of salt mixtures  have been reported in various media. A nutrient medium is defined by its mineral salt composition, carbon source, vitamins, plant growth regulators (PGR) and other organic supplements. When referring to a particular medium, the intention is to identify only the salt composition unless otherwise specified. Any number and concentration of amino acids, vitamins, growth regulators and organic supplements can be added in an infinite variety of compositions to a given salt composition in order to achieve the desired product.

Abstract

Since the beginning of the civilization, medicinal plants have been used to prevent and treat various ailments. At present, most of the pharmaceutical/ nutraceutical industries highly depend on wild medicinal plants for the supply of raw materials for extraction of bioactive compounds. As medicinal plants receive increased scientific and commercial attention, there is increasing pressure on the wild medicinal plant populations.

SEX IS VERY COSTLY

Large amounts of energy required to find a mate and do the mating: specialized structures and behavior required

Intimate contact provides route for infection by parasites (AIDS, syphillis, etc.)

Genetic costs: in sex you pass on only half your genes to your children

Males are an expensive luxury- in most species they contribute little to rearing offspring

But There are Some Advantages

More genetic diversity: more potential for survival of species when environmental conditions change

Shuffling of genes in meiosis (random separation of homologous chromosomes)

Crossing-over in meiosis (see below)

Fertilization (genes from 2 individuals brought together)

ALL MOLECULES MOVE CONTINUOUSLY BY SIMPLE DIFFUSION

Heat energy causes molecules to move randomly (sometimes called Brownian motion)

If the concentration of molecules is different in 2 regions (this produces a concentration gradient), diffusion will cause molecules to move from a region of high concentration to one of low concentration

The higher the concentration gradient the more rapid the net diffusion

Diffusion evens out the concentrations so they are equal everywhere (maximum entropy)

If 2 different substances have the same concentration gradient, usually one will move faster than the other

Differences in speed between molecules with the same concentration gradient are given in terms of diffusion constants

A substance with a high diffusion constant moves faster than one with a low diffusion constant

In general, large molecules move slower than small molecules

Diffusion across a membrane is called permeability, and membrane diffusion constants are called permeability constants

About Mendel

Born in what is now the Czeck Republic.

Grew up in an agricultural environment.

Became a priest-teacher at a local monastery.

Took courses in botany, physics, and mathematics at the University of Vienna.

Gregor Mendel was the first person to comprehend some of the most basic principles of genetics. He reached these understandings in the mid-nineteenth century; working in what is now the Czech Republic and using as his experimental subjects a species of garden pea, Pisum sativum..

Carried out “hybridization” experiments with the common garden pea.

Mendel’s hypotheses became the laws of inheritance in modern genetics.

Mendel’s work re-discovered by Correns, DeVries, and Tschermak in 1900. Period of modern “Mendelian” genetics begin.

Historically the first and still the most conclusive evidence for the existence of genes comes from the phenomenon of segregation of traits observed in the offspring of hybrids between individuals or strains that differ in some recognizable respect. The principle of segregation was formulated by Gregor Johann Mendel in 1866 under such peculiar circumstances that the scientific world failed to recognize it until after a lapse of 34 years. In the first place Gregor Mendel was not primarily a biologist but a Monk in the Augustinian monastery at Bruenn, Austria (now Brno, Moravia in Czech Republic). During his childhood, Mendel worked as a gardener and studied beekeeping. He became part time monk because it enabled him to obtain an education without having to pay for it himself. From 1840 to 1843 he studied Practical and Theoretical Philosophy and Physics at the Philosophical Institute of the University of Olomouc. Upon recommendation of his teacher, Mendel entered the Augustinian St. Thomas Abbey in Brno and began his training as a Priest. Born Johann Mendel, he took the name Gregor upon entering religious life. Mendel worked also as a substitute High School teacher. In 1850, he failed the oral part of his examination and could not become a certified High School Teacher. In 1851, he was sent to the University of Vienna to study further so that he could get formal education. Mendel returned to his Abbey in 1853 as a Physics teacher. In 1856, he took the examination to become a certified teacher but again failed the oral part.

A fair number of practical breeding experiments were done in ancient times

People knew there was a connection between sex and reproduction

The idea had developed that “like begets like”

By selecting certain plants and animals and breeding them many domestic varieties of plants and animals had been developed

Example: corn was developed from a wild grass in Mexico and Central America, probably about 5000 years ago

149 of the top 150 plant crops were domesticated by primitive man

Abstract

Meta analysis quantitatively summarizes the findings of a large collection of individual experiments. It is a powerful statistical tool since it integrates a vast literature and thus includes large sample size. It leads to a stronger conclusion than traditional literary review as studies are analyzed applying statistical methods. Meta- analysis is increasingly being applied in different fields of biological sciences. It has been emerged as an independent subfield of modern health science researches as in this field very few studies achieve statistical power in isolation. Meta- analysis has also become an integral part of plant science research, e.g., agricultural research, ethnobotanical research, tea and health science research etc. Meta-analysis has few limitations although rigorously conducted meta- analyses are considered more valuable than any single study contributing to the analysis.

Metabolic fingerprinting and profiling provide powerful approaches for investigating global biochemical changes within biological systems. This chapter explains the principles of metabolic fingerprinting and profiling and distinguishes between broad, untargeted characterization and targeted analysis of selected metabolites. It discusses experimental design, sample preparation, analytical platforms, data preprocessing, normalization, statistical analysis, and multivariate approaches used to identify meaningful metabolic patterns. Techniques such as principal component analysis and related statistical methods help reveal differences between biological conditions. The chapter highlights applications in disease investigation, agricultural research, environmental studies, food analysis, and biotechnology, while emphasizing the importance of reproducible analytical procedures and appropriate interpretation of complex metabolomic datasets.

Metabolism - sum total of all chemical reactions in living cells

Catabolic reactions - degrade macromolecules and other molecules to release energy

Anabolic reactions - used to synthesize macromolecules for cell growth, repair, and reproduction

Can divide metabolism into 4 groups: carbohydrates, lipids, amino acids, nucleotides.