eChapters

Calcification

Calcification is the deposition of calcium phosphates and calcium carbonates in soft tissues other than bones and teeth. It may be classified as dystrophic and metastatic calcification.

Dystrophic Calcification

Dystrophic calcification is characterized by the deposits of calcium salts in necrosed tissue of any organ (Fig 8.1).

Etiology /Occurrence

• Necrosis.

• Parasitic infections.

• Tuberculous lesions.

Cloudy Swelling

Swelling of cells occur with hazy appearance due to a mild injury. The cells take more water due to defect in sodium pump leading to swollen mitochondria which gives granular cytoplasmic appearance. It is the first reaction of cell to the mildest injury. Cloudy swelling is a reversible reaction (Figs. 4.1 & 4. 2).

Etiology

• Can be caused by even mildest injury.

• Any factor causing interference with metabolism of the cell like bacterial toxins, fever, diabetes, circulatory disturbances etc.

Macroscopic features

• Organ becomes enlarged and rounded.

• Weight of organ increases.

• Bulging on cut surfaces.

• Amount of fluid increases in organ.

Microscopic features

• Swelling of cells, edges become rounded.

• Increased size of cells.

• Cytoplasm of the cells becomes hazy/cloudy due to increased granularity.

• Can be seen in liver, kidney and muscles.

Congestion/ Hyperemia

Hyperemia is increased amount of blood in circulatory system. It is of two types, active and passive. In active hyperemia blood accumulates in arteries while in passive hyperemia the amount of blood increases in veins (Figs. 3.1. to 3.4).

Etiology

• As a result of inflammation.

• Obstruction of blood vessels.

Macroscopic features

• Organ becomes dark red/cyanotic.

• Size of organ increases.

Aplasia/Agenesis

Aplasia or agenesis is absence of any organ (Fig. 9.1).

Hypoplasia

Hypoplasia is failure of an organ/tissue to attain its full size (Fig. 9.1).

Etiology

• Congenital anomalies e.g. hypoplasia of kidneys in calves.

• Inadequate innervation.

• Inadequate blood supply.

• Malnutrition.

• Infections e.g. cerebral hypoplasia in bovine viral diarrhoea.

Abstract

Cyanobacteria were first oxygen evolving photosynthetic organisms on Earth, which not only survived under harsh conditions of primitive Earth but are also dominant and efficient photosynthesizers and N₂ fixers of present time which significantly contribute to fertility of paddy fields as natural biofertilizers. Cyanobacteria require solar radiation to carry out photosynthesis and nitrogen fixation. The stratospheric ozone depletion which has resulted in an increase in ultraviolet-B (UV-B; 280 - 315 nm) radiation on the Earth’s surface has been reported to inhibit a number of photochemical and photobiological processes in cyanobacteria. However, they have evolved mechanisms such as synthesis of photoprotective compound scytonemin and their derivatives to counteract the damaging effects of UV-B. In addition to Photoprotection, scytonemin has biotechnological potentials and several applications in biology and allied sciences.

Abstract

Temperate ornamental plants, owing to their special functions, are always in great demand due to their possible uses in temperate landscape plantings (both outdoor and indoor). This ever increasing demand has led to urgent need for their mass-scale multiplication on commercial scale. At present, most of these plants are being multiplied and supplied on a limited scale by concerned Government and private agencies but this is not sufficient. Progressive orchardists of temperate zone and particularly those inhabiting marginal lands which no longer yield regular income, can specially incorporate the element of commercial floriculture in the vacant places in their orchards or through establishment of small polyhouses. Introduction, multiplication and production on large scale of commercially important ornamental trees, shrubs, climbers, bulbous plants, herbaceous perennials, cut flowers, potted plants and seed production of important annuals and perennials by the progressive orchardists in their orchard will yield fruitful returns through their sale and will narrow the constant demand for these plants in the urban and rural areas and will definitely improve the fragile ecology of the hills in the long run. The interested orchardists can collect germplasm of these plants from various Govt. and private agencies. Such an intervention in the existing orchard cropping system will definitely increase the income of the farmers from the same available area and will be a right step towards diversification.

Abstract

The various options available with the fruit growers in temperate areas through floriculture are i) Growing traditional flowers such flowers are honeysuckle, hydrangea, roses of many sorts including Rosa banksiae ( vars alba, lutea), R. moschala, R. wichuriana, R. laevigata, bush roses, Jasminum humile, J. officinale, J. auriculatum, J. mesnyi, spiroea, Passiflora, Fuchsia, Wisteria chinensis, Hibiscus syriacus, Viburnum, Camellia  japonica, Cestrum, etc. ii) Growing cut flowers, iii) Growing annuals. The hardy annuals include Alyssum, Antirrhinum, Anchusa, Brachycome, Calendula, Candytuft, Centaurea, Chrysanthemum (annual), Clarkia, Cornflower, Eschscholtzia, Godetia, Helichrysum, Lathyrus, Larkspur, Linaria, Linum, Lobelia, Lupinus, Matthiola, Nasturtium, Nemesia, Nemophila, Nigella, Phacelia, Poppy, Reseda, Salpiglossis, Saponaria, Vaccaria, Venidium, Viola, etc.  Shade loving annuals are Salvia, Cineraria, Tropaeolum majus, etc. iv) Production of flower seeds and bulbs v) Growing herbaceous annuals vi) Plant rentals. The space between the trees and other plants can be utilized for potted plants, hanging baskets, making bonsai etc. vii) Dried flowers and floral crafts etc.

Introduction

Floriculture is the branch of horticulture concerning cultivation of flowering and ornamental plants for gardens and floristry. It includes cut flowers, cut greens, bedding plant, houseplants, flowering garden and pot plants etc. It is a fast growing industry. Urbanization and rising living standards of the people has lead to steady increase in demand of flowers and flower products making floriculture as one of the most important commercial trades in Agriculture. It has been found that commercial floriculture has higher potential per unit area than most of the field crops and is therefore a lucrative business.

Crop diversification has been well recognized as an effective strategy for achieving the objectives of food and nutritional security, income growth, poverty alleviation, employment generation, judicious use of land, water and other natural resources, sustaining agricultural development and environmental improvement. Vegetable crops being rich sources of various health building substances, especially vitamins and minerals, offer unique advantage for food and nutritional security, tackle malnutrition and dietary deficiency diseases. Besides, their high yield potential per unit area and time, diverse varietal wealth, labour intensiveness, high market price and prospects of processing, value addition and export, they play an important role in employment generation, and livelihood improvement. Since India is endowed with diverse agro-climatic conditions, almost all kinds of vegetable crops are grown in one or other corner of our country. More than 200 different vegetables are grown in India, of which, about 70 types are cultivated commercially. Vegetable production scenario in India has made a remarkable progress since independence from a meagre production of 17.5 million tonnes to 146 million tones, with a productivity of 17.3 t/ha. India is the second largest vegetable producer in the world after China. However, it needs to be doubled by 2020 in order to meet the nutritional requirement of burgeoning population in the country. With increasing purchasing power of people, the demand for vegetables has increased enormously, as a result the prices of vegetables have increased and it has been the dominant factor for high inflationary pressure in Indian economy during recent years. Inclusion of different vegetable crops with shorter maturity period in the prevailing cropping system will enhance the total system productivity, which may go a long way in improving the economic as well as physical health of small and marginal farmers.

The arid zone of India covers about 12% of the country’s geographical area and occupies over 31.7 mha of hot desert and about 7 m ha under cold desert. The arid regions of Rajasthan, Gujarat, Punjab and Haryana together constitute the Great Indian Desert known as Thar Desert that accounts for 89.6% of hot arid regions of India. In Gujarat, 6.22 m ha area is under arid zone which constitute 19.6% of the arid area of country (Fig 1). In Gujarat, eight districts fall under arid zone, namely, Kachchh (100% of district area), Jamnagar (80%), Surendranagar (29%), Junagadh (20%), Banaskantha (18%), Mehsana (7%), Ahmedabad (6%) and Rajkot 6%).

Farming system is a complex inter-related matrix of soil, plants, animals, implements, power, labour, capital and other inputs controlled in part by farm families and influenced by varying degrees of political, economic, institutional and social forces that operate at many levels. In farming system there is integration of farm enterprises such as cropping systems, animal husbandry, fisheries, forestry, sericulture, poultry etc.

Globally, 2 billion children under the age of five suffer from diarrhoea, of which, more than 50% of the cases being in South Asia and sub-Saharan Africa, where the disease is more likely to be fatal (UNICEF-WHO, 2009). It has been also estimated that the great majority of acute diarrhoeal illnesses in children over the age of two years is attributable to bacterial pathogens (Carpenter, 1980). Amongst the various enteric bacterial pathogens, diarrheagenic strains of Escherichia coli are considerably responsible for causing bacterial diarrhea (Nataro and Kaper, 1998).

Genetic diversity is one of the fundamental character present in any population or species. It is the total variation either phenotypic or genotypic which have occured in a population through due course of evolution. Variation in any species depends on mutation, substitution (insertion/deletion) and response to selection. However, comprehensive studies on theoretical and empirical perspectives for diversity analysis may be found by evolutionary biologists to understand the factor that influences levels of genetic diversity in natural population (Lewontin, 1974). In brief, nucleotides/ protein codes are the basic unit to quantify total amount of variation. Bioinformatic tools and techniques help us to measure inferring relationships between genes, proteins or organisms through use of these DNA/protein sequences by integration of mathematical algorithms, statistical and computer databases.

Diversity analysis is popularly known as phylogenetic analysis in bioinformatic terms. The basic principle of phylogeny is analysis/alignment of characters; whether it is morphological or molecular data. For instance, in case of morphological data of a crop species, the leaf colour/stem colour/fruit colour/grain size etc. may be compared however sequence data is problem of interest for molecular phylogeny. The evolutionary history of any crop species/ organisms inferred from phylogeny analysis mostly depicted through treelike diagrams/ dendrograms. In this chapter, phylogenetic analysis based on only nucleotide/protein sequences are discussed. For analysis of phylogenetics, default assumptions (Baxevanis and Ouellette, 2006) are:

INTRODUCTION

Indigenous agroforestry systems exhibit a great intricacy with respect to their components where trees, shrubs, climbers and grasses are common. In the north-western Himalaya, farmers maintain naturally regenerating tree/shrub species, particularly on edges of terraced agriculture fields without any significant input of manpower. These systems are called as indigenous agroforestry system (Ram and Singh 1996; Vishvakarma et al. 1998, Thakur et al. 2004 and 2005). Shrubs have been meeting the fuel wood requirement of the local peasants from forest as well as village wasteland and field boundaries. Shrub dominated ecosystems extend from arctic to tropical region and occur over the entire moisture gradient from desert to wetland (Specth 1979; DI Castro 1981; West 1983). 

1. Introduction

India, as a party to the Convention on Biological Diversity (CBD), has obliged to document a whole range of organism diversity within her territorial boundaries, make all attempts to conserve these bio-resources and monitor the efficacy of the conservation measures adopted. With its diverse ecological conditions and unique geographical location, Indian landmass supports rich diversity of algal flora. However, this algal wealth needs to be systematically surveyed and documented from all possible habitats. Ecological patterns emerged from recent studies within India are assessed with the identification of knowledge gaps and conservation implications in algal systematics.

During last one decade, great advances have been made in the field of Algology/Phycology throughout the world. Over the years algae has attained a greater reputation and popularity because of its economic importance, particularly as food, for commercial products, water contamination, toxin production, sewage oxidation, municipal water purification in fisheries and above all for the study of fundamental scientific information. But before the algae put in to such important use, it is imperative to have a baseline data about the material in question. Without knowing the status of algal resources of any area one cannot have projections for their utilization or gain knowledge of their ecological role and functions. The taxonomy of algae is, therefore, a prerequisite for all applied fields of algae apart from academic interest. Recent global surveys have revealed that there is lack of knowledge about fresh water algal diversity of tropical countries including India.

1. Introduction

The gymnosperms constitute a distinct subdivision of spermatophytes, the seed bearing plants. The term ‘gymnosperm’ is derived from Greek words, gymnos, naked and sperma, seed, which indicates that these are naked-seeded plants, i.e., those in which the seeds are not enclosed within the fruits but are borne freely exposed on an open carpel. In contrast in the angiosperms the seeds are enclosed within a closed carpel (ovary). The first known use of the term gymnosperm was given by Theophrastus in 300 BC in his book “Enquiry into Plants” to describe “plants with unprotected seeds”. Goebel (1905) rightly described gymnosperms as “Phanerogams without ovary”. The Scottish botanist, Robert Brown in 1825 first distinguished gymnosperms from angiosperms. At one time they were considered to be single class of seed plants, called Gymnospermae, but taxonomists are now tend to recognise four distinct divisions of extant gymnospermous plants - coniferophyta (Pinophyta), Cycadophyta, Ginkgophyta and Gnetophyta. Geological history reveals that all divisions of gymnosperms have been distinct groups since their origin.

Among the gymnosperms are plants with stems that may barely project above the ground and others develop into the largest trees on the earth. The extant gymnosperms are a small group of plants comprising ca. 1026 species belonging to 83 genera and 12 families (Christenhusz et al. 2011). They are distributed throughout the world, with extensive latitudinal and longitudinal ranges. Economically, gymnosperms are of outstanding value, fulfilling the greater proportion of our timber as well as resin requirements. They are also the dominant forest makers of the world and in addition they play a leading role in the preservation of the environment (Sahni 1990). By far the largest group of living gymnosperms is the conifers (pines, cypresses and relatives), followed by cycads and Gnetales (Gnetum, Ephedra and Welwitschia).

4.1 General description

Most temperate forest habitats support a small number of animal and tree species with wide geographic distributions, whereas the montane forests support a large number of species with narrow geographic distributions. "For mankind's most prevalent disease, we have a multiplicity of diagnoses, each provided with maximum casualness," Prof Galbrith writes in one of his publications. Poverty is a difficult situation to be in. It would be beneficial if we knew what was causing the problem. Obviously, there isn't a single answer. Many explanations are presented because they include a small amount of truth. However, one reason of poverty is pervasive: the historical or present link between land and people. Food, clothing, and shelter are all provided by the land. Poverty exists if these are not available." This statement by Galbrith, which is relevant for shifting agriculture areas with excessive rains and turbulent rivers, summarizes the genesis and cause of every responsible individual's considerable worry for good land management and soil maintenance. To round out the aspects of this issue, there is need to add 'environment' and 'ecology’ to this.

Many microbes have ability to attach to various surfaces forming three dimensional extracellular matrix within which embedded the microbes grow and multiply forming thin layer structure called biofilm. Biofilms may form on living or non-living surfaces and can be prevalent in natural, industrial and hospital settings (Hall-Stoodley et al., 2004). Biofilm mainly consist of three components - bacteria, matrix and surface. Extracellular matrix generally composed of extracellular polymeric compounds such as extracellular polysaccharides, proteins, phospholipids, DNA, teichoic and nucleic acids, and other polymeric substances hydrated to 85 to 95% water and polysaccharides (Hall-Stoodley et al., 2004).

Turmeric (Curcuma longa L.) is a tropical herbaceous plant extensively cultivated in India, Sri Lanka, parts of China and Pakistan.  Country of origin is not known with certainity, it is either of Chineese or Indian origin. India ranks first in area (1.49 lakh ha.) and production (5.27 lakh tonnes.) in the world and it is grown in most of the states in the country.  Major turmeric growing states are Andhra Pradesh (56,000 ha.), Orissa (23,000 ha.), Tamilnadu (17,000 ha.), Assam (12,000 ha.), West Bengal (11,000 ha.) Maharashtra (6,000 ha.)  Karnataka (6,000 ha.) and Kerala (3,000 ha.).  Andhra Pradesh ranks first in area and production in the country. Area under this crop is increasing in North Eastern States.

Turmeric belongs to family Zingiberaceae and genus Curcuma. Genus Curcuma has 42 species, of which Curcuma longa is extensively cultivated for culinary purposes, Curcuma aromatica for flavour and recently Curcuma amada (mango ginger) for preparation of chutneys. Turmeric is mainly cultivated for under ground rhizomes, rich in curcumin. Turmeric is traditionally used for medicinal, religious, culinary purposes and also as a cosmetic and dye (Shah 1997). Recent reports in controlling human cancer has given renewed interest on the crop. In Ayurveda, turmeric is regarded as aromatic, a stimulant tonic, carminative and anti helminthic. Essential oil of turmeric is antiseptic and is used in treating gall stones and gall complaints (Pruthi 1976).

Abstract

A field study of seven arid districts of Rajasthan was undertaken to evaluate the occurrence of selected tree species and arbuscular mycorrhizal fungal (AMF) associations with them. Five genera were identified in the rhizosphere of these selected tree species. A high diversity of AMF was observed which varied between different host tree species. Among the five genera, Glomus occurred most frequently, with four species, Acaulospora and Gigaspora were found with three species, while Entrophospora and Scutellospora was detected with two species. Gigaspora margarita, Gigaspora rosea, Glomus deserticola, Glomus constrictum, Glomus fasciculatum, Glomus mosseae and Scutellospora calospora were the most dominant species. The AMF spore density was not clearly affected by the host tree suggesting that biotic factors may be relatively less important than abiotic/edaphic factors for establishing population pattern. The spore density of AMF had a strong positive correlation with soil pH and organic carbon content and a negative correlation with Olsen’s P content of the soil. The association with AMF of these tree species native to the harsh environmental conditions of the Indian Thar Desert may play a significant role in the re-establishment and conservation of these multipurpose desert tree species.